AMTR_s00010p00267640 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.541

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG_01_0000521 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000521_tree ,
OG_02_0000857 (LandPlants) Phylogenetic Tree(s): OG_02_0000857_tree ,
OG_03_0000717 (SeedPlants) Phylogenetic Tree(s): OG_03_0000717_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00267640
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008502001 No alias O-fucosyltransferase 37 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e030982_P001 No alias rhamnosyltransferase 0.06 Archaeplastida
Solyc12g038670.2.1 No alias rhamnosyltransferase 0.01 LandPlants
Zm00001e030982_P001 No alias rhamnosyltransferase 0.06 LandPlants
Zm00001e030982_P001 No alias rhamnosyltransferase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 458 777
IPR001841 Znf_RING 235 275
No external refs found!