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  5. Len_g02014

Len_g02014


Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000996 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000996_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g02014

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00189250 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT3G05560 No alias Ribosomal L22e protein family 0.09 OrthoFinder output from all 47 species
AT5G27770 No alias Ribosomal L22e protein family 0.09 OrthoFinder output from all 47 species
Adi_g012189 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Adi_g124335 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Aop_g10541 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Aop_g22540 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Ceric.08G045600.1 Ceric.08G045600 component *(eL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ceric.26G014800.1 Ceric.26G014800 component *(eL22) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001206.7 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Cre07.g357850 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
Dac_g04863 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g18517 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01028021001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01031130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 OrthoFinder output from all 47 species
GSVIVT01031158001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01035141001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Gb_08874 No alias component RPL22 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Gb_36164 No alias component RPL22 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os03g22340.1 LOC_Os03g22340 component RPL22 of LSU proteome component 0.04 OrthoFinder output from all 47 species
LOC_Os07g47710.1 LOC_Os07g47710 component RPL22 of LSU proteome component 0.06 OrthoFinder output from all 47 species
MA_130453g0010 No alias component RPL22 of LSU proteome component 0.07 OrthoFinder output from all 47 species
Mp4g02920.1 No alias component RPL22 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Msp_g03306 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c11_630V3.1 Pp3c11_630 Ribosomal L22e protein family 0.03 OrthoFinder output from all 47 species
Pp3c1_120V3.1 Pp3c1_120 Ribosomal L22e protein family 0.06 OrthoFinder output from all 47 species
Pp3c2_28500V3.1 Pp3c2_28500 Ribosomal L22e protein family 0.06 OrthoFinder output from all 47 species
Pp3c2_28510V3.1 Pp3c2_28510 Ribosomal L22e protein family 0.06 OrthoFinder output from all 47 species
Pp3c7_27030V3.1 Pp3c7_27030 Ribosomal L22e protein family 0.02 OrthoFinder output from all 47 species
Sam_g32393 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g41282 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo270704 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc01g099830.3.1 Solyc01g099830 component RPL22 of LSU proteome component 0.11 OrthoFinder output from all 47 species
Solyc09g075155.1.1 Solyc09g075155 component RPL22 of LSU proteome component 0.09 OrthoFinder output from all 47 species
Spa_g22846 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g25050 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Spa_g33994 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Spa_g42689 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Tin_g36488 No alias component *(eL22) of large ribosomal-subunit (LSU)... 0.08 OrthoFinder output from all 47 species
Zm00001e035835_P001 Zm00001e035835 component RPL22 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e038221_P001 Zm00001e038221 component RPL22 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 21 130
No external refs found!