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  5. Len_g01278

Len_g01278


Description : regulatory protein *(ZC11A) of mRNA export & original description: none


Gene families : OG0001116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001116_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01278

Target Alias Description ECC score Gene Family Method Actions
Adi_g059321 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Adi_g059322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075164 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene62776.t1 Aspi01Gene62776 regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010117 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G004600.1 Ceric.23G004600 regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Dac_g29062 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Dcu_g24147 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.04 OrthoFinder output from all 47 species
Nbi_g17064 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Ore_g28422 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.03 OrthoFinder output from all 47 species
Solyc01g008170.3.1 Solyc01g008170 C3H zinc finger transcription factor. regulatory... 0.02 OrthoFinder output from all 47 species
Spa_g17319 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.02 OrthoFinder output from all 47 species
Tin_g12003 No alias regulatory protein *(ZC11A) of mRNA export & original... 0.04 OrthoFinder output from all 47 species
Zm00001e023520_P001 Zm00001e023520 C3H zinc finger transcription factor. regulatory... 0.02 OrthoFinder output from all 47 species
Zm00001e041908_P001 Zm00001e041908 C3H zinc finger transcription factor. regulatory... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041686 Znf-CCCH_3 7 63
No external refs found!