AT3G45620


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0001737 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001737_tree ,
OG_02_0002907 (LandPlants) Phylogenetic Tree(s): OG_02_0002907_tree ,
OG_03_0003462 (SeedPlants) Phylogenetic Tree(s): OG_03_0003462_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G45620
Cluster HCCA: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g17780.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp6g04120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g17780.1 No alias no hits & (original description: none) 0.01 LandPlants
LOC_Os03g17780.1 No alias no hits & (original description: none) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IPI Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 49 83
IPR001680 WD40_repeat 312 349
No external refs found!