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  5. Len_g00985

Len_g00985


Description : regulatory factor *(RIQ) of thylakoid grana stacking & original description: none


Gene families : OG0004779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g00985

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00084050 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
AT1G74730 No alias Protein of unknown function (DUF1118) 0.07 OrthoFinder output from all 47 species
Adi_g039949 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aev_g00516 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ala_g17180 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aob_g05587 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aop_g12282 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Azfi_s0157.g053809 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ceric.25G059600.1 Ceric.25G059600 regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dac_g01953 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ehy_g17265 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Gb_16180 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g40310.1 LOC_Os01g40310 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_10433575g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Mp3g09060.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g04786 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Nbi_g15112 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Ore_g05228 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Ore_g05229 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pir_g20319 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Solyc03g113240.3.1 Solyc03g113240 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g04757 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Tin_g32284 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Zm00001e020546_P001 Zm00001e020546 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009500 DUF1118 87 200
No external refs found!