Len_g00837

Description : component *(Sm-D3) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex & original description: none

Gene families : OG0003441 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003441_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g00837

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01019262001	No alias	RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm...	0.02	OrthoFinder output from all 47 species
Mp1g11210.1	No alias	component Sm-D3 of U1/U2/U4/U5-associated Sm accessory...	0.02	OrthoFinder output from all 47 species
Solyc03g033600.3.1	Solyc03g033600	component Sm-D3 of U1/U2/U4/U5-associated Sm accessory...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000808	origin recognition complex	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006259	DNA metabolic process	IEP	HCCA
BP	GO:0006260	DNA replication	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001163	LSM_dom_euk/arc	30	93

External Links

No external refs found!