Cre24.g755347


Description : 27.1.2 RNA.processing.RNA helicase embryo defective 3011 (EMB3011)


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre24.g755347
Cluster HCCA cluster: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT3G26560 No alias ATP-dependent RNA helicase, putative 0.02 Gene family
AT3G62310 No alias RNA helicase family protein 0.02 Gene family
AT5G13010 EMB3011 RNA helicase family protein 0.01 Gene family
Cpa|evm.model.tig00000842.2 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.01 Gene family
Cpa|evm.model.tig00000984.27 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.04 Gene family
Cpa|evm.model.tig00021589.28 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.01 Gene family
GSVIVT01028153001 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
LOC_Os05g32370 Os05g0389800 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Smo429199 PACid_15414793 No description available 0.01 Gene family
Zm00001d011963 GRMZM2G300375 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.02 Gene family
Zm00001d045147 GRMZM2G000371,... 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 737 889
IPR011709 DUF1605 1271 1332
IPR007502 Helicase-assoc_dom 1128 1213
IPR001650 Helicase_C 933 1063
No external refs found!