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  5. Len_g00492

Len_g00492


Description : methylation reader *(MBD10-11) & original description: none


Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g00492

Target Alias Description ECC score Gene Family Method Actions
Als_g21478 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
MA_72639g0010 MBD10 methylation reader (MBD10-11) 0.02 OrthoFinder output from all 47 species
MA_75004g0010 MBD10 methylation reader (MBD10-11) 0.02 OrthoFinder output from all 47 species
Nbi_g15405 No alias methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19997 MBD10 methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09426 No alias methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018451 MBD10 methylation reader *(MBD10-11) & original description:... 0.02 OrthoFinder output from all 47 species
Spa_g12685 MBD11, ATMBD11 methylation reader *(MBD10-11) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47995 No alias methylation reader *(MBD10-11) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017958_P001 MBD11, ATMBD11,... methylation reader (MBD10-11) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005956 protein kinase CK2 complex IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 31 92
No external refs found!