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  5. Len_g00450

Len_g00450 (SYP32, ATSYP32)


Aliases : SYP32, ATSYP32

Description : Qa-type SYP3-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0002044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002044_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g00450

Target Alias Description ECC score Gene Family Method Actions
Ala_g01818 SYP32, ATSYP32 Qa-type SYP3-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Mp1g08030.1 SYP32, ATSYP32 SYP3-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
Smo233311 SYP32, ATSYP32 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
CC GO:0000145 exocyst IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR021538 Syntaxin-5_N 1 23
IPR006011 Syntaxin_N 221 278
IPR000727 T_SNARE_dom 282 331
No external refs found!