Zm00001e041546_P002


Description : SSU processome assembly factor (TOZ)


Gene families : OG_01_0003962 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003962_tree ,
OG_02_0005807 (LandPlants) Phylogenetic Tree(s): OG_02_0005807_tree ,
OG_03_0006787 (SeedPlants) Phylogenetic Tree(s): OG_03_0006787_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e041546_P002
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.18 Archaeplastida
Cpa|evm.model.tig00000704.60 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00000704.61 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
Cpa|evm.model.tig00000704.62 No alias No description available 0.03 Archaeplastida
Cre07.g344050 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 Archaeplastida
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.08 Archaeplastida
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.18 Archaeplastida
MA_10601g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10601g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_566936g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g08070.1 No alias SSU processome assembly factor (TOZ) 0.06 Archaeplastida
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.16 Archaeplastida
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.18 Archaeplastida
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 LandPlants
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.18 LandPlants
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 LandPlants
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.06 LandPlants
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.17 LandPlants
MA_566936g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp8g08070.1 No alias SSU processome assembly factor (TOZ) 0.05 LandPlants
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.15 LandPlants
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 LandPlants
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.18 LandPlants
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 SeedPlants
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.18 SeedPlants
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 SeedPlants
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.06 SeedPlants
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.17 SeedPlants
MA_566936g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.18 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0032040 small-subunit processome IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013934 SSU_processome_Utp13 680 813
IPR001680 WD40_repeat 397 437
IPR001680 WD40_repeat 501 532
IPR001680 WD40_repeat 443 479
IPR001680 WD40_repeat 578 615
IPR001680 WD40_repeat 106 143
IPR001680 WD40_repeat 541 574
IPR001680 WD40_repeat 75 101
IPR001680 WD40_repeat 192 229
IPR001680 WD40_repeat 149 187
No external refs found!