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Len_g00237


Description : assembly factor involved in RuBisCo assembly *(BSD2) & original description: none


Gene families : OG0007502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007502_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g00237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00065110 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from all 47 species
Aev_g06316 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Ala_g06623 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Als_g00356 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Aop_g26060 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene34881.t1 Aspi01Gene34881 assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34883.t1 Aspi01Gene34883 assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Ceric.36G042600.1 Ceric.36G042600 assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Dac_g38788 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Dac_g38789 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Dcu_g03433 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Dde_g14872 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Msp_g11910 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Msp_g29361 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.07 OrthoFinder output from all 47 species
Nbi_g01616 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Ore_g07584 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.02 OrthoFinder output from all 47 species
Ore_g07585 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.04 OrthoFinder output from all 47 species
Pir_g60370 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.05 OrthoFinder output from all 47 species
Ppi_g57647 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018366 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species
Sam_g15087 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.06 OrthoFinder output from all 47 species
Spa_g03931 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.12 OrthoFinder output from all 47 species
Tin_g09665 No alias assembly factor involved in RuBisCo assembly *(BSD2) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!