Zm00001e040095_P002


Description : Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana (sp|o65567|pp342_arath : 856.0)


Gene families : OG_01_0007364 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007364_tree ,
OG_02_0005355 (LandPlants) Phylogenetic Tree(s): OG_02_0005355_tree ,
OG_03_0010911 (SeedPlants) Phylogenetic Tree(s): OG_03_0010911_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e040095_P002
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.03 Archaeplastida
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Gb_06104 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.04 Archaeplastida
LOC_Os09g25550.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.07 Archaeplastida
MA_157201g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.06 Archaeplastida
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 Archaeplastida
Pp3c5_2530V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Archaeplastida
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.03 LandPlants
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
Gb_06104 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.04 LandPlants
LOC_Os09g25550.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.08 LandPlants
MA_157201g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.03 LandPlants
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 LandPlants
Mp1g07710.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 LandPlants
Pp3c5_2530V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 LandPlants
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.03 SeedPlants
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
Gb_06104 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.03 SeedPlants
LOC_Os09g25550.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.08 SeedPlants
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 856 913
IPR002885 Pentatricopeptide_repeat 716 775
IPR002885 Pentatricopeptide_repeat 380 426
IPR002885 Pentatricopeptide_repeat 801 842
IPR002885 Pentatricopeptide_repeat 279 308
IPR002885 Pentatricopeptide_repeat 557 583
IPR002885 Pentatricopeptide_repeat 626 652
IPR002885 Pentatricopeptide_repeat 353 377
IPR002885 Pentatricopeptide_repeat 313 341
IPR002885 Pentatricopeptide_repeat 456 482
No external refs found!