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  5. Zm00001e040095_P002

Zm00001e040095_P002


Description : Pentatricopeptide repeat-containing protein At4g30825, chloroplastic OS=Arabidopsis thaliana (sp|o65567|pp342_arath : 856.0)


Gene families : OG_01_0007364 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007364_tree ,
OG_02_0005355 (LandPlants) Phylogenetic Tree(s): OG_02_0005355_tree ,
OG_03_0010911 (SeedPlants) Phylogenetic Tree(s): OG_03_0010911_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e040095_P002
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.03 Archaeplastida
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Gb_06104 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.04 Archaeplastida
LOC_Os09g25550.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.07 Archaeplastida
MA_157201g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.06 Archaeplastida
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 Archaeplastida
Pp3c5_2530V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Archaeplastida
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.03 LandPlants
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
Gb_06104 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.04 LandPlants
LOC_Os09g25550.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.08 LandPlants
MA_157201g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.03 LandPlants
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 LandPlants
Mp1g07710.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 LandPlants
Pp3c5_2530V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 LandPlants
AMTR_s00065p00020910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g30825,... 0.03 SeedPlants
AT4G30825 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
Gb_06104 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.03 SeedPlants
LOC_Os09g25550.1 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.08 SeedPlants
MA_187850g0010 No alias Pentatricopeptide repeat-containing protein At4g30825,... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 856 913
IPR002885 Pentatricopeptide_repeat 716 775
IPR002885 Pentatricopeptide_repeat 380 426
IPR002885 Pentatricopeptide_repeat 801 842
IPR002885 Pentatricopeptide_repeat 279 308
IPR002885 Pentatricopeptide_repeat 557 583
IPR002885 Pentatricopeptide_repeat 626 652
IPR002885 Pentatricopeptide_repeat 353 377
IPR002885 Pentatricopeptide_repeat 313 341
IPR002885 Pentatricopeptide_repeat 456 482
No external refs found!