AT3G43300 (ATMIN7, BEN1)

Aliases : ATMIN7, BEN1

Description : HOPM interactor 7

Gene families : OG_01_0001057 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001057_tree ,
OG_02_0005925 (LandPlants) Phylogenetic Tree(s): OG_02_0005925_tree ,
OG_03_0007536 (SeedPlants) Phylogenetic Tree(s): OG_03_0007536_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G43300
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00145310	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.05	Archaeplastida
AMTR_s00041p00031550	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.08	Archaeplastida
AMTR_s00131p00043500	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.06	Archaeplastida
Cpa\|evm.model.tig00000852.23	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	Archaeplastida
Cre09.g390319	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.09	Archaeplastida
GSVIVT01014993001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.13	Archaeplastida
GSVIVT01023854001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.18	Archaeplastida
GSVIVT01027623001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.12	Archaeplastida
Gb_04048	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.12	Archaeplastida
Gb_07642	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.13	Archaeplastida
Gb_26513	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.14	Archaeplastida
LOC_Os03g14260.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.1	Archaeplastida
LOC_Os06g41780.2	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.03	Archaeplastida
LOC_Os07g37750.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.15	Archaeplastida
MA_10429864g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.08	Archaeplastida
MA_20138g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.12	Archaeplastida
MA_20563g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.13	Archaeplastida
Mp7g11590.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.16	Archaeplastida
Mp8g18220.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.14	Archaeplastida
Pp3c11_12270V3.1	No alias	SEC7-like guanine nucleotide exchange family protein	0.07	Archaeplastida
Pp3c18_8290V3.1	No alias	HOPM interactor 7	0.05	Archaeplastida
Pp3c7_14180V3.1	No alias	SEC7-like guanine nucleotide exchange family protein	0.11	Archaeplastida
Smo173646	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.13	Archaeplastida
Smo85621	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.07	Archaeplastida
Solyc01g091460.3.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.16	Archaeplastida
Solyc01g112350.3.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.16	Archaeplastida
Solyc12g017830.3.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.2	Archaeplastida
Zm00001e001058_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.13	Archaeplastida
Zm00001e010568_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.17	Archaeplastida
Zm00001e025045_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.05	Archaeplastida
Zm00001e035267_P004	No alias	No annotation	0.19	Archaeplastida
Zm00001e037574_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.18	Archaeplastida
AMTR_s00131p00043500	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.06	LandPlants
GSVIVT01014993001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.12	LandPlants
Gb_07642	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.13	LandPlants
LOC_Os07g37750.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.14	LandPlants
MA_20138g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.11	LandPlants
Mp7g11590.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.16	LandPlants
Pp3c21_12020V3.1	No alias	HOPM interactor 7	0.01	LandPlants
Smo85621	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.06	LandPlants
Solyc12g017830.3.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.18	LandPlants
Zm00001e010568_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.17	LandPlants
Zm00001e035267_P004	No alias	No annotation	0.19	LandPlants
AMTR_s00131p00043500	evm_27.TU.AmTr_v1...	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.06	SeedPlants
GSVIVT01014993001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.12	SeedPlants
Gb_07642	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.13	SeedPlants
LOC_Os07g37750.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.14	SeedPlants
MA_20138g0010	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.1	SeedPlants
Solyc12g017830.3.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.18	SeedPlants
Zm00001e010568_P001	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.16	SeedPlants
Zm00001e035267_P004	No alias	No annotation	0.18	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005768	endosome	None	Extended
CC	GO:0005769	early endosome	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010638	positive regulation of organelle organization	RCA	Interproscan
BP	GO:0016192	vesicle-mediated transport	IMP	Interproscan
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030695	GTPase regulator activity	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	RCA	Interproscan
BP	GO:0040007	growth	IMP	Interproscan
BP	GO:0042742	defense response to bacterium	IMP	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	IBA	Interproscan
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032629	DCB_dom	96	238
IPR015403	Sec7_C	1092	1174
IPR000904	Sec7_dom	599	780
IPR032691	Sec7_N	335	505

External Links

No external refs found!

AT3G43300 (ATMIN7, BEN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation