Zm00001e039987_P001


Description : Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana (sp|o81028|pp171_arath : 376.0)


Gene families : OG_01_0010121 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010121_tree ,
OG_02_0010541 (LandPlants) Phylogenetic Tree(s): OG_02_0010541_tree ,
OG_03_0010187 (SeedPlants) Phylogenetic Tree(s): OG_03_0010187_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e039987_P001
Cluster HCCA: Cluster_295

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00087550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g26790,... 0.04 Archaeplastida
AT1G13800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
GSVIVT01015849001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.06 Archaeplastida
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.05 Archaeplastida
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.07 Archaeplastida
AT1G13800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 LandPlants
GSVIVT01015849001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.06 LandPlants
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.05 LandPlants
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.05 LandPlants
AMTR_s00044p00087550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g26790,... 0.02 SeedPlants
AT1G13800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 SeedPlants
AT2G26790 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 SeedPlants
GSVIVT01015849001 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.06 SeedPlants
Gb_41674 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.03 SeedPlants
Solyc05g012920.3.1 No alias Pentatricopeptide repeat-containing protein At2g26790,... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 546 571
IPR002885 Pentatricopeptide_repeat 225 252
IPR002885 Pentatricopeptide_repeat 299 345
IPR002885 Pentatricopeptide_repeat 646 692
IPR002885 Pentatricopeptide_repeat 436 484
IPR002885 Pentatricopeptide_repeat 577 624
IPR002885 Pentatricopeptide_repeat 731 780
IPR002885 Pentatricopeptide_repeat 398 429
IPR002885 Pentatricopeptide_repeat 502 532
No external refs found!