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  5. AT3G42960

AT3G42960 (ATA1, TA1, ASD)


Aliases : ATA1, TA1, ASD

Description : TAPETUM 1


Gene families : OG_01_0000154 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000154_tree ,
OG_02_0000088 (LandPlants) Phylogenetic Tree(s): OG_02_0000088_tree ,
OG_03_0015038 (SeedPlants) Phylogenetic Tree(s): OG_03_0015038_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G42960
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00030p00243810 evm_27.TU.AmTr_v1... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
AMTR_s00030p00244570 evm_27.TU.AmTr_v1... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
AMTR_s00044p00056720 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana 0.06 Archaeplastida
AT3G26760 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
AT3G26770 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 Archaeplastida
GSVIVT01028200001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01033915001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.01 Archaeplastida
GSVIVT01033919001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.01 Archaeplastida
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
Gb_05036 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_13572 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_17570 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.05 Archaeplastida
Gb_19302 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.02 Archaeplastida
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
Gb_25236 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_30464 No alias no hits & (original description: none) 0.01 Archaeplastida
Gb_30884 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
Gb_30885 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
Gb_34140 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
Gb_35889 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Gb_40683 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os03g18740.1 No alias Sex determination protein tasselseed-2 OS=Zea mays... 0.03 Archaeplastida
LOC_Os03g61740.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g10000.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os04g10010.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os07g46840.1 No alias Tropinone reductase-like 2 OS=Erythroxylum coca... 0.06 Archaeplastida
LOC_Os07g46846.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g46860.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
LOC_Os07g46870.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os07g46910.1 No alias Tropinone reductase-like 2 OS=Erythroxylum coca... 0.05 Archaeplastida
LOC_Os07g46920.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
LOC_Os07g46970.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
LOC_Os11g32030.1 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os12g16010.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.04 Archaeplastida
MA_10436701g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
MA_10436701g0020 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
MA_107740g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.07 Archaeplastida
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_2492g0010 No alias xanthoxin oxidase (ABA2) 0.02 Archaeplastida
MA_932914g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_97011g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Mp1g09710.1 No alias Short-chain dehydrogenase reductase 3a OS=Arabidopsis... 0.03 Archaeplastida
Mp1g17390.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp3g24690.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp5g00680.1 No alias Short-chain dehydrogenase reductase 3c OS=Arabidopsis... 0.02 Archaeplastida
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.04 Archaeplastida
Mp6g11590.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 Archaeplastida
Smo79955 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g005500.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Solyc01g091660.3.1 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g083170.2.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Solyc11g018600.1.1 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.18 Archaeplastida
Solyc12g056610.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.06 Archaeplastida
Solyc12g056700.2.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Solyc12g056710.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
Zm00001e006254_P002 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e021516_P001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e035437_P002 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.03 LandPlants
AT3G26770 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.01 LandPlants
GSVIVT01028200001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.04 LandPlants
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 LandPlants
LOC_Os03g18740.1 No alias Sex determination protein tasselseed-2 OS=Zea mays... 0.02 LandPlants
LOC_Os03g61740.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 LandPlants
LOC_Os04g10000.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 LandPlants
LOC_Os04g10010.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 LandPlants
LOC_Os07g46910.1 No alias Tropinone reductase-like 2 OS=Erythroxylum coca... 0.02 LandPlants
LOC_Os11g32030.1 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 LandPlants
LOC_Os12g16010.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 LandPlants
MA_10436701g0020 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 LandPlants
MA_107740g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.04 LandPlants
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 LandPlants
MA_954240g0010 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 LandPlants
Mp1g09710.1 No alias Short-chain dehydrogenase reductase 3a OS=Arabidopsis... 0.02 LandPlants
Mp3g24690.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 LandPlants
Mp3g24700.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.01 LandPlants
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.01 LandPlants
Solyc11g018600.1.1 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.16 LandPlants
Solyc12g056710.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 LandPlants
Zm00001e006254_P002 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 LandPlants
Zm00001e035437_P002 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 LandPlants
AMTR_s00044p00056720 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana 0.01 SeedPlants
MA_107740g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 SeedPlants
Solyc11g018600.1.1 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.15 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0009908 flower development ISS Interproscan
BP GO:0010584 pollen exine formation RCA Interproscan
MF GO:0016491 oxidoreductase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!