AT3G42800


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 853 Blast hits to 340 proteins in 98 species: Archae - 0; Bacteria - 94; Metazoa - 145; Fungi - 62; Plants - 95; Viruses - 0; Other Eukaryotes - 457 (source: NCBI BLink).


Gene families : OG_01_0006119 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006119_tree ,
OG_02_0004162 (LandPlants) Phylogenetic Tree(s): OG_02_0004162_tree ,
OG_03_0002654 (SeedPlants) Phylogenetic Tree(s): OG_03_0002654_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G42800
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00214860 evm_27.TU.AmTr_v1... Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01016780001 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_19565 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_25832g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_36020g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_464588g0010 No alias Protein BIG GRAIN 1-like A OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_67269g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86183g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9563494g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g121970.1.1 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana... 0.03 Archaeplastida
AMTR_s00024p00214860 evm_27.TU.AmTr_v1... Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana 0.03 LandPlants
GSVIVT01016780001 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana 0.03 LandPlants
Gb_19565 No alias no hits & (original description: none) 0.04 LandPlants
MA_100548g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_25832g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_36020g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_464588g0010 No alias Protein BIG GRAIN 1-like A OS=Arabidopsis thaliana... 0.02 LandPlants
MA_63144g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_67269g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_86183g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_9563494g0010 No alias no hits & (original description: none) 0.03 LandPlants
Solyc03g121970.1.1 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana... 0.03 LandPlants
Gb_19565 No alias no hits & (original description: none) 0.02 SeedPlants
MA_25832g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_63144g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_67269g0010 No alias no hits & (original description: none) 0.01 SeedPlants
MA_86183g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_9563494g0010 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc03g121970.1.1 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!