AT3G42660


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0006073 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006073_tree ,
OG_02_0007953 (LandPlants) Phylogenetic Tree(s): OG_02_0007953_tree ,
OG_03_0008508 (SeedPlants) Phylogenetic Tree(s): OG_03_0008508_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G42660
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
Solyc03g114690.4.1 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.03 Archaeplastida
MA_10431892g0020 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.02 LandPlants
Solyc03g114690.4.1 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.03 LandPlants
Solyc03g114690.4.1 No alias LHP1-regulatory component ELP1 of PRC1 histone... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0006260 DNA replication RCA Interproscan
BP GO:0006261 DNA-dependent DNA replication RCA Interproscan
BP GO:0006270 DNA replication initiation RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0008283 cell population proliferation RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle RCA Interproscan
BP GO:0016458 gene silencing RCA Interproscan
BP GO:0016570 histone modification RCA Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0048449 floral organ formation RCA Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0051726 regulation of cell cycle RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR022100 Mcl1_mid 432 714
IPR001680 WD40_repeat 57 89
IPR001680 WD40_repeat 137 173
IPR024977 Apc4_WD40_dom 216 288
No external refs found!