Zm00001e038437_P002


Description : Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana (sp|q8gyl7|pp361_arath : 625.0)


Gene families : OG_01_0006806 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006806_tree ,
OG_02_0007343 (LandPlants) Phylogenetic Tree(s): OG_02_0007343_tree ,
OG_03_0007467 (SeedPlants) Phylogenetic Tree(s): OG_03_0007467_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e038437_P002
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.09 Archaeplastida
AT5G02830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 Archaeplastida
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.07 Archaeplastida
LOC_Os03g17634.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 Archaeplastida
Mp3g16970.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.01 Archaeplastida
Pp3c22_3070V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 Archaeplastida
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.07 Archaeplastida
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.07 LandPlants
AT5G02830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 LandPlants
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.07 LandPlants
LOC_Os03g17634.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 LandPlants
Mp3g16970.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.01 LandPlants
Pp3c22_3070V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 LandPlants
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 LandPlants
AMTR_s00023p00232870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02830,... 0.06 SeedPlants
AT5G02830 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 SeedPlants
GSVIVT01025541001 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.07 SeedPlants
LOC_Os03g17634.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 SeedPlants
Solyc09g007200.4.1 No alias Pentatricopeptide repeat-containing protein At5g02830,... 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 487 535
IPR002885 Pentatricopeptide_repeat 547 603
IPR002885 Pentatricopeptide_repeat 374 434
IPR033443 PPR_long 216 342
No external refs found!