Zm00001e038060_P001


Description : Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana (sp|q9sz52|pp344_arath : 1095.0)


Gene families : OG_01_0008852 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008852_tree ,
OG_02_0008546 (LandPlants) Phylogenetic Tree(s): OG_02_0008546_tree ,
OG_03_0005697 (SeedPlants) Phylogenetic Tree(s): OG_03_0005697_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e038060_P001
Cluster HCCA: Cluster_285

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.03 Archaeplastida
AT4G31850 PGR3 proton gradient regulation 3 0.05 Archaeplastida
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
Gb_22719 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 Archaeplastida
Gb_22724 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 Archaeplastida
Gb_33624 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 Archaeplastida
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.06 Archaeplastida
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 Archaeplastida
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.04 LandPlants
AT4G31850 PGR3 proton gradient regulation 3 0.03 LandPlants
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 LandPlants
Gb_22719 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 LandPlants
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.06 LandPlants
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 LandPlants
AMTR_s00019p00039970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g31850,... 0.02 SeedPlants
AT4G31850 PGR3 proton gradient regulation 3 0.03 SeedPlants
GSVIVT01035975001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.04 SeedPlants
Gb_22719 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 SeedPlants
Gb_22724 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 SeedPlants
LOC_Os10g28600.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.06 SeedPlants
Solyc04g015440.4.1 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 737 762
IPR002885 Pentatricopeptide_repeat 422 447
IPR033443 PPR_long 189 332
IPR002885 Pentatricopeptide_repeat 345 393
IPR002885 Pentatricopeptide_repeat 449 497
IPR002885 Pentatricopeptide_repeat 1044 1084
IPR002885 Pentatricopeptide_repeat 837 883
IPR002885 Pentatricopeptide_repeat 589 637
IPR002885 Pentatricopeptide_repeat 908 953
IPR002885 Pentatricopeptide_repeat 767 811
IPR002885 Pentatricopeptide_repeat 974 1018
IPR002885 Pentatricopeptide_repeat 519 567
No external refs found!