1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G28640

AT3G28640


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0013931 (Archaeplastida) Phylogenetic Tree(s): OG_01_0013931_tree ,
OG_02_0000789 (LandPlants) Phylogenetic Tree(s): OG_02_0000789_tree ,
OG_03_0000692 (SeedPlants) Phylogenetic Tree(s): OG_03_0000692_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G28640
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AT3G28660 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 LandPlants
AT4G14170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 LandPlants
AT4G22760 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 LandPlants
GSVIVT01004902001 No alias Pentatricopeptide repeat-containing protein At4g22760... 0.06 LandPlants
GSVIVT01027951001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 LandPlants
LOC_Os07g15570.1 No alias Pentatricopeptide repeat-containing protein At2g46050,... 0.04 LandPlants
LOC_Os08g06490.2 No alias Pentatricopeptide repeat-containing protein At4g22760... 0.04 LandPlants
LOC_Os09g24520.2 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.07 LandPlants
LOC_Os09g24640.1 No alias Pentatricopeptide repeat-containing protein At2g36730... 0.04 LandPlants
MA_118590g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.06 LandPlants
MA_470679g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.06 LandPlants
Solyc02g094125.1.1 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.05 LandPlants
Solyc04g063270.2.1 No alias no hits & (original description: none) 0.06 LandPlants
Solyc10g006730.1.1 No alias Pentatricopeptide repeat-containing protein At4g22760... 0.03 LandPlants
Zm00001e002394_P001 No alias Pentatricopeptide repeat-containing protein At2g21090... 0.05 LandPlants
Zm00001e021453_P001 No alias Pentatricopeptide repeat-containing protein At5g06540... 0.05 LandPlants
Zm00001e029450_P001 No alias Pentatricopeptide repeat-containing protein At2g46050,... 0.08 LandPlants
Zm00001e031660_P001 No alias Pentatricopeptide repeat-containing protein At4g14170... 0.04 LandPlants
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 SeedPlants
AT4G14170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 SeedPlants
AT4G22760 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 SeedPlants
GSVIVT01004902001 No alias Pentatricopeptide repeat-containing protein At4g22760... 0.06 SeedPlants
GSVIVT01027951001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 SeedPlants
LOC_Os07g15570.1 No alias Pentatricopeptide repeat-containing protein At2g46050,... 0.03 SeedPlants
LOC_Os08g06490.2 No alias Pentatricopeptide repeat-containing protein At4g22760... 0.04 SeedPlants
LOC_Os09g24520.2 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.06 SeedPlants
LOC_Os09g24640.1 No alias Pentatricopeptide repeat-containing protein At2g36730... 0.04 SeedPlants
MA_470679g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.06 SeedPlants
Solyc02g087610.1.1 No alias Pentatricopeptide repeat-containing protein At3g28660... 0.02 SeedPlants
Solyc04g063270.2.1 No alias no hits & (original description: none) 0.05 SeedPlants
Solyc10g006730.1.1 No alias Pentatricopeptide repeat-containing protein At4g22760... 0.03 SeedPlants
Zm00001e002394_P001 No alias Pentatricopeptide repeat-containing protein At2g21090... 0.03 SeedPlants
Zm00001e029450_P001 No alias Pentatricopeptide repeat-containing protein At2g46050,... 0.07 SeedPlants
Zm00001e031660_P001 No alias Pentatricopeptide repeat-containing protein At4g14170... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 181 229
IPR002885 Pentatricopeptide_repeat 359 383
IPR002885 Pentatricopeptide_repeat 80 107
IPR002885 Pentatricopeptide_repeat 286 314
IPR002885 Pentatricopeptide_repeat 258 285
No external refs found!