Zm00001e036159_P001


Description : transcription factor (MADS/AGL)


Gene families : OG_01_0000011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000011_tree ,
OG_02_0004419 (LandPlants) Phylogenetic Tree(s): OG_02_0004419_tree ,
OG_03_0002756 (SeedPlants) Phylogenetic Tree(s): OG_03_0002756_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e036159_P001
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00218870 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00013p00114420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00053p00228660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00071p00198970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00089p00081270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AT1G71692 XAL1, AGL12 AGAMOUS-like 12 0.03 Archaeplastida
AT1G77950 AGL67 AGAMOUS-like 67 0.02 Archaeplastida
AT2G03710 AGL3, SEP4 K-box region and MADS-box transcription factor family protein 0.06 Archaeplastida
AT2G14210 ANR1, AGL44 AGAMOUS-like 44 0.04 Archaeplastida
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT2G45660 SOC1, AGL20, ATSOC1 AGAMOUS-like 20 0.08 Archaeplastida
AT3G57390 AGL18 AGAMOUS-like 18 0.03 Archaeplastida
AT4G18960 AG K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT4G24540 AGL24 AGAMOUS-like 24 0.05 Archaeplastida
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
GSVIVT01008140001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01008560001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.05 Archaeplastida
GSVIVT01010221001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
GSVIVT01014093001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
GSVIVT01019883001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01022182001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01025945001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01035477001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Gb_03068 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_12778 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Gb_15398 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Gb_30604 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_38920 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38922 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_41550 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os02g52340.1 No alias transcription factor (MADS/AGL) 0.06 Archaeplastida
LOC_Os03g03100.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os03g11614.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os03g54160.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os03g54170.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os05g11414.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os06g11330.1 No alias transcription factor (MADS/AGL) 0.13 Archaeplastida
LOC_Os08g41960.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os09g32948.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_254338g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_9841429g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Smo113962 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
Smo121275 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Smo69980 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
Solyc01g093960.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc03g114830.3.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc04g076280.4.1 No alias MADS-box protein SVP OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g081000.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc05g012020.4.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc06g059970.4.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc08g080100.4.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc11g010570.2.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e000846_P003 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e003667_P001 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e005705_P004 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e005708_P002 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e006950_P001 No alias transcription factor (MADS/AGL) 0.06 Archaeplastida
Zm00001e010125_P001 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e012024_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e012026_P002 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e016529_P004 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e018811_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e026007_P004 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e027034_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e030373_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e031267_P003 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e034629_P001 No alias transcription factor (MADS/AGL) 0.06 Archaeplastida
Zm00001e038716_P004 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e039774_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
AT4G24540 AGL24 AGAMOUS-like 24 0.05 LandPlants
LOC_Os02g52340.1 No alias transcription factor (MADS/AGL) 0.06 LandPlants
LOC_Os06g11330.1 No alias transcription factor (MADS/AGL) 0.12 LandPlants
Solyc11g010570.2.1 No alias transcription factor (MADS/AGL) 0.04 LandPlants
AT4G24540 AGL24 AGAMOUS-like 24 0.03 SeedPlants
LOC_Os06g11330.1 No alias transcription factor (MADS/AGL) 0.12 SeedPlants
Solyc11g010570.2.1 No alias transcription factor (MADS/AGL) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 91 171
No external refs found!