AT3G27640


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0006286 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006286_tree ,
OG_02_0007694 (LandPlants) Phylogenetic Tree(s): OG_02_0007694_tree ,
OG_03_0007497 (SeedPlants) Phylogenetic Tree(s): OG_03_0007497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G27640
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00252440 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.07 Archaeplastida
Cre01.g036100 No alias No description available 0.03 Archaeplastida
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.11 Archaeplastida
Gb_09523 No alias no hits & (original description: none) 0.09 Archaeplastida
LOC_Os03g49200.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10429760g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429760g0020 No alias no hits & (original description: none) 0.1 Archaeplastida
Mp8g16590.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.1 Archaeplastida
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.1 Archaeplastida
AMTR_s00014p00252440 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.05 LandPlants
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.11 LandPlants
Gb_09523 No alias no hits & (original description: none) 0.08 LandPlants
LOC_Os03g49200.1 No alias no hits & (original description: none) 0.04 LandPlants
MA_10429760g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_10429760g0020 No alias no hits & (original description: none) 0.09 LandPlants
Mp8g16590.1 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.09 LandPlants
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.08 LandPlants
AMTR_s00014p00252440 evm_27.TU.AmTr_v1... COMPASS-like H3K4 histone methylase component WDR5A... 0.05 SeedPlants
GSVIVT01032413001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.09 SeedPlants
Gb_09523 No alias no hits & (original description: none) 0.08 SeedPlants
LOC_Os03g49200.1 No alias no hits & (original description: none) 0.04 SeedPlants
MA_10429760g0020 No alias no hits & (original description: none) 0.09 SeedPlants
Solyc02g086470.3.1 No alias no hits & (original description: none) 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006261 DNA-dependent DNA replication RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 124 156
IPR001680 WD40_repeat 376 410
IPR001680 WD40_repeat 330 365
IPR001680 WD40_repeat 161 199
No external refs found!