AT3G27170 (ATCLC-B, CLC-B)

Aliases : ATCLC-B, CLC-B

Description : chloride channel B

Gene families : OG_01_0000546 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000546_tree ,
OG_02_0012010 (LandPlants) Phylogenetic Tree(s): OG_02_0012010_tree ,
OG_03_0012061 (SeedPlants) Phylogenetic Tree(s): OG_03_0012061_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G27170
Cluster	HCCA: Cluster_255

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01012828001	No alias	Solute transport.carrier-mediated transport.CLC anion...	0.08	Archaeplastida
LOC_Os08g20570.1	No alias	anion channel / anion:proton antiporter (CLC)	0.05	Archaeplastida
LOC_Os12g25200.1	No alias	anion channel / anion:proton antiporter (CLC)	0.06	Archaeplastida
Solyc01g103140.3.1	No alias	anion channel / anion:proton antiporter (CLC)	0.03	Archaeplastida
Solyc02g068080.3.1	No alias	anion channel / anion:proton antiporter (CLC)	0.04	Archaeplastida
LOC_Os12g25200.1	No alias	anion channel / anion:proton antiporter (CLC)	0.03	LandPlants
Solyc02g068080.3.1	No alias	anion channel / anion:proton antiporter (CLC)	0.04	LandPlants
LOC_Os12g25200.1	No alias	anion channel / anion:proton antiporter (CLC)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005244	voltage-gated ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	ISS	Interproscan
MF	GO:0005253	anion channel activity	ISS	Interproscan
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	TAS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005774	vacuolar membrane	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006821	chloride transport	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated anion channel activity	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0009671	nitrate:proton symporter activity	IDA	Interproscan
CC	GO:0009705	plant-type vacuole membrane	IDA	Interproscan
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015112	nitrate transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015293	symporter activity	None	Extended
MF	GO:0015294	solute:cation symporter activity	None	Extended
MF	GO:0015295	solute:proton symporter activity	None	Extended
MF	GO:0015296	anion:cation symporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0015513	high-affinity secondary active nitrite transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022853	active ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000644	CBS_dom	710	761
IPR001807	Cl-channel_volt-gated	142	556

External Links

No external refs found!

AT3G27170 (ATCLC-B, CLC-B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation