Cpa|evm.model.tig00000325.13


Description : 17.5.2 hormone metabolism.ethylene.signal transduction Similar to prokaryote sensory transduction proteins.


Gene families : OG_01_0000095 (Gene family) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00000325.13
Cluster HCCA cluster: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000237.35 No alias 17.4.2 hormone metabolism.cytokinin.signal transduction... 0.03 Gene family
Cre13.g571200 No alias 29.4 protein.postranslational modification... 0.01 Gene family
MA_67531g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Solyc12g011330.3.1 Solyc12g011330.3 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d013486 GRMZM2G102601 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
Zm00001d033642 GRMZM2G073668 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d051889 GRMZM2G075368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003661 HisK_dim/P 660 709
IPR013515 Phytochrome_cen-reg 361 456
IPR013515 Phytochrome_cen-reg 457 517
IPR001789 Sig_transdc_resp-reg_receiver 894 1020
IPR003018 GAF 189 328
IPR003594 HATPase_C 744 865
IPR008207 Sig_transdc_His_kin_Hpt_dom 1160 1240
IPR013767 PAS_fold 554 614
No external refs found!