AT3G25790

Description : myb-like transcription factor family protein

Gene families : OG_01_0001192 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001192_tree ,
OG_02_0000884 (LandPlants) Phylogenetic Tree(s): OG_02_0000884_tree ,
OG_03_0000674 (SeedPlants) Phylogenetic Tree(s): OG_03_0000674_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G25790
Cluster	HCCA: Cluster_133

Target	Alias	Description	ECC score	Gene Family Method
AT2G03500	No alias	Homeodomain-like superfamily protein	0.04	Archaeplastida
LOC_Os01g08160.1	No alias	G2-like GARP transcription factor	0.04	Archaeplastida
MA_14087g0010	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
MA_541749g0010	No alias	G2-like GARP transcription factor	0.03	Archaeplastida
Pp3c20_11430V3.1	No alias	Homeodomain-like superfamily protein	0.02	Archaeplastida
Smo402040	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	Archaeplastida
Zm00001e016724_P001	No alias	G2-like GARP transcription factor	0.02	Archaeplastida
AMTR_s00093p00110710	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	LandPlants
AMTR_s00122p00127250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	LandPlants
AT2G03500	No alias	Homeodomain-like superfamily protein	0.03	LandPlants
LOC_Os01g08160.1	No alias	G2-like GARP transcription factor	0.04	LandPlants
MA_14087g0010	No alias	G2-like GARP transcription factor	0.02	LandPlants
MA_541749g0010	No alias	G2-like GARP transcription factor	0.03	LandPlants
Smo402040	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	LandPlants
LOC_Os01g08160.1	No alias	G2-like GARP transcription factor	0.01	SeedPlants
MA_541749g0010	No alias	G2-like GARP transcription factor	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G25790

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation