Zm00001e033165_P001


Description : mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP trafficking complex


Gene families : OG_01_0001027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001027_tree ,
OG_02_0000803 (LandPlants) Phylogenetic Tree(s): OG_02_0000803_tree ,
OG_03_0017207 (SeedPlants) Phylogenetic Tree(s): OG_03_0017207_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e033165_P001
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00035940 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
AT5G59950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000194.40 No alias RNA processing.messenger ribonucleoprotein particle... 0.01 Archaeplastida
GSVIVT01025009001 No alias RNA processing.messenger ribonucleoprotein particle... 0.06 Archaeplastida
Gb_04102 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
Gb_18965 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
Gb_33262 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.07 Archaeplastida
MA_102122g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_4147g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.05 Archaeplastida
MA_44083g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
MA_961018g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g07590.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
Pp3c25_13340V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Solyc04g014460.4.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.04 Archaeplastida
Solyc10g086400.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.04 Archaeplastida
Solyc11g073280.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 Archaeplastida
AMTR_s00012p00035940 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.03 LandPlants
AT5G02530 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
AT5G59950 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 LandPlants
GSVIVT01025009001 No alias RNA processing.messenger ribonucleoprotein particle... 0.06 LandPlants
Gb_04102 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants
Gb_18965 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants
Gb_33262 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.07 LandPlants
MA_102122g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_4147g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants
MA_44083g0010 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants
MA_961018g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp2g07590.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants
Pp3c25_13340V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
Solyc04g014460.4.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.04 LandPlants
Solyc10g086400.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.04 LandPlants
Solyc11g073280.2.1 No alias mRNA-binding adaptor component ALY/Tho4 of TREX/THO mRNP... 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025715 FoP_C 188 243
IPR000504 RRM_dom 87 153
No external refs found!