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  5. AMTR_s00010p00259960

AMTR_s00010p00259960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.431

Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component


Gene families : OG_01_0003320 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003320_tree ,
OG_02_0004054 (LandPlants) Phylogenetic Tree(s): OG_02_0004054_tree ,
OG_03_0004746 (SeedPlants) Phylogenetic Tree(s): OG_03_0004746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00259960
Cluster HCCA: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.21 No alias Protein degradation.26S proteasome.20S core... 0.01 Archaeplastida
Pp3c3_28170V3.1 No alias 20S proteasome alpha subunit C1 0.05 Archaeplastida
Pp3c12_12990V3.1 No alias 20S proteasome alpha subunit C1 0.02 LandPlants
Pp3c3_28170V3.1 No alias 20S proteasome alpha subunit C1 0.05 LandPlants
Solyc02g081700.1.1 No alias component alpha type-3 of 26S proteasome 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 30 215
IPR000426 Proteasome_asu_N 5 27
No external refs found!