Zm00001e032135_P002


Description : transcription factor (ARF)


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0021212 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0020450 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e032135_P002
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00082980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.05 Archaeplastida
AT4G30080 ARF16 auxin response factor 16 0.07 Archaeplastida
Gb_39685 No alias transcription factor (ARF) 0.02 Archaeplastida
Gb_39686 No alias transcription factor (ARF) 0.04 Archaeplastida
LOC_Os01g48060.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os04g57610.1 No alias transcription factor (ARF) 0.07 Archaeplastida
LOC_Os05g43920.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os05g48870.1 No alias transcription factor (ARF) 0.06 Archaeplastida
LOC_Os11g32110.1 No alias transcription factor (ARF) 0.03 Archaeplastida
LOC_Os12g41950.1 No alias transcription factor (ARF) 0.03 Archaeplastida
MA_103763g0010 No alias Auxin response factor 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_137387g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp2g02890.1 No alias Auxin response factor 19 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c13_4720V3.1 No alias auxin response factor 6 0.02 Archaeplastida
Pp3c14_16990V3.1 No alias auxin response factor 6 0.03 Archaeplastida
Pp3c1_40270V3.1 No alias auxin response factor 6 0.04 Archaeplastida
Pp3c26_11550V3.1 No alias auxin response factor 6 0.02 Archaeplastida
Solyc05g056040.3.1 No alias transcription factor (ARF) 0.03 Archaeplastida
Solyc11g069190.2.1 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e008040_P002 No alias transcription factor (ARF) 0.08 Archaeplastida
Zm00001e018761_P001 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e021527_P006 No alias transcription factor (ARF) 0.06 Archaeplastida
Zm00001e028396_P001 No alias transcription factor (ARF) 0.03 Archaeplastida
Zm00001e032423_P002 No alias transcription factor (ARF) 0.08 Archaeplastida
LOC_Os05g43920.1 No alias transcription factor (ARF) 0.06 LandPlants
LOC_Os05g43920.1 No alias transcription factor (ARF) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0009725 response to hormone IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 130 231
IPR010525 Auxin_resp 257 336
No external refs found!