AMTR_s00010p00259130 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.420

Description : Lipid metabolism.sphingolipid metabolism.sphingobase hydroxylase


Gene families : OG_01_0001429 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001429_tree ,
OG_02_0002152 (LandPlants) Phylogenetic Tree(s): OG_02_0002152_tree ,
OG_03_0002002 (SeedPlants) Phylogenetic Tree(s): OG_03_0002002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00259130
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Solyc01g010860.3.1 No alias sphingobase hydroxylase 0.02 LandPlants
Solyc01g010860.3.1 No alias sphingobase hydroxylase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 97 211
No external refs found!