Zm00001e030419_P001


Description : plastidial mRNA processing factor (PPR10)


Gene families : OG_01_0002673 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002673_tree ,
OG_02_0001952 (LandPlants) Phylogenetic Tree(s): OG_02_0001952_tree ,
OG_03_0001479 (SeedPlants) Phylogenetic Tree(s): OG_03_0001479_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e030419_P001
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.06 Archaeplastida
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.03 Archaeplastida
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.05 Archaeplastida
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.07 Archaeplastida
MA_71865g0010 No alias plastidial mRNA processing factor (PPR10) 0.04 Archaeplastida
MA_8893308g0010 No alias plastidial mRNA processing factor (PPR10) 0.05 Archaeplastida
Mp8g08650.1 No alias plastidial mRNA processing factor (PPR10) 0.02 Archaeplastida
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.05 Archaeplastida
AMTR_s00029p00034550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.02 LandPlants
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.06 LandPlants
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.03 LandPlants
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.05 LandPlants
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.06 LandPlants
MA_6146g0010 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
MA_71865g0010 No alias plastidial mRNA processing factor (PPR10) 0.04 LandPlants
MA_8893308g0010 No alias plastidial mRNA processing factor (PPR10) 0.05 LandPlants
Mp8g08650.1 No alias plastidial mRNA processing factor (PPR10) 0.02 LandPlants
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.05 LandPlants
AMTR_s00001p00272430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g18940,... 0.02 SeedPlants
AMTR_s00029p00034670 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g02860... 0.04 SeedPlants
GSVIVT01029248001 No alias Pentatricopeptide repeat-containing protein At2g18940,... 0.02 SeedPlants
Gb_07042 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
Gb_13589 No alias plastidial mRNA processing factor (PPR10) 0.05 SeedPlants
LOC_Os05g19380.1 No alias plastidial mRNA processing factor (PPR10) 0.05 SeedPlants
LOC_Os07g40120.1 No alias plastidial mRNA processing factor (PPR10) 0.08 SeedPlants
MA_6146g0010 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
MA_71865g0010 No alias plastidial mRNA processing factor (PPR10) 0.02 SeedPlants
MA_8893308g0010 No alias plastidial mRNA processing factor (PPR10) 0.09 SeedPlants
MA_96691g0010 No alias plastidial mRNA processing factor (PPR10) 0.03 SeedPlants
Solyc07g017760.1.1 No alias plastidial mRNA processing factor (PPR10) 0.06 SeedPlants
Zm00001e035434_P001 No alias plastidial mRNA processing factor (PPR10) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 171 221
IPR002885 Pentatricopeptide_repeat 404 433
IPR002885 Pentatricopeptide_repeat 663 694
IPR002885 Pentatricopeptide_repeat 240 270
IPR002885 Pentatricopeptide_repeat 703 733
IPR002885 Pentatricopeptide_repeat 457 486
IPR002885 Pentatricopeptide_repeat 739 762
IPR002885 Pentatricopeptide_repeat 278 319
IPR002885 Pentatricopeptide_repeat 488 537
IPR002885 Pentatricopeptide_repeat 594 643
IPR002885 Pentatricopeptide_repeat 348 395
No external refs found!