AT3G22200 (GABA-T, HER1, POP2)


Aliases : GABA-T, HER1, POP2

Description : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein


Gene families : OG_01_0004356 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004356_tree ,
OG_02_0003365 (LandPlants) Phylogenetic Tree(s): OG_02_0003365_tree ,
OG_03_0003525 (SeedPlants) Phylogenetic Tree(s): OG_03_0003525_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G22200
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015821001 No alias Amino acid metabolism.degradation.gamma-aminobutyrate... 0.05 Archaeplastida
Gb_17949 No alias GABA pyruvate transaminase 0.02 Archaeplastida
LOC_Os04g52450.1 No alias GABA pyruvate transaminase 0.03 Archaeplastida
LOC_Os08g10510.1 No alias GABA pyruvate transaminase 0.03 Archaeplastida
Solyc07g043310.3.1 No alias GABA pyruvate transaminase 0.06 Archaeplastida
Zm00001e006948_P001 No alias GABA pyruvate transaminase 0.04 Archaeplastida
GSVIVT01015821001 No alias Amino acid metabolism.degradation.gamma-aminobutyrate... 0.03 LandPlants
Solyc07g043310.3.1 No alias GABA pyruvate transaminase 0.04 LandPlants
Zm00001e006948_P001 No alias GABA pyruvate transaminase 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0003867 4-aminobutyrate transaminase activity ISS Interproscan
MF GO:0003867 4-aminobutyrate transaminase activity NAS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
BP GO:0005985 sucrose metabolic process IMP Interproscan
BP GO:0006020 inositol metabolic process IMP Interproscan
BP GO:0006105 succinate metabolic process IMP Interproscan
BP GO:0006536 glutamate metabolic process IMP Interproscan
BP GO:0006540 glutamate decarboxylation to succinate IMP Interproscan
BP GO:0006541 glutamine metabolic process IMP Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
BP GO:0006816 calcium ion transport RCA Interproscan
BP GO:0006979 response to oxidative stress IDA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
MF GO:0008270 zinc ion binding IDA Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
BP GO:0009448 gamma-aminobutyric acid metabolic process IMP Interproscan
BP GO:0009450 gamma-aminobutyric acid catabolic process IMP Interproscan
BP GO:0009651 response to salt stress IMP Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0009860 pollen tube growth IMP Interproscan
BP GO:0009860 pollen tube growth NAS Interproscan
BP GO:0009865 pollen tube adhesion IMP Interproscan
BP GO:0010033 response to organic substance IMP Interproscan
BP GO:0010154 fruit development IMP Interproscan
BP GO:0010183 pollen tube guidance IMP Interproscan
BP GO:0019484 beta-alanine catabolic process IMP Interproscan
MF GO:0034387 4-aminobutyrate:pyruvate transaminase activity IDA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0048367 shoot system development IMP Interproscan
MF GO:0050897 cobalt ion binding IDA Interproscan
BP GO:0051788 response to misfolded protein RCA Interproscan
BP GO:0080129 proteasome core complex assembly RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005814 Aminotrans_3 70 488
No external refs found!