Zm00001e028052_P001


Description : transcription factor (TUB)


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0000295 (LandPlants) Phylogenetic Tree(s): OG_02_0000295_tree ,
OG_03_0005934 (SeedPlants) Phylogenetic Tree(s): OG_03_0005934_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e028052_P001
Cluster HCCA: Cluster_356

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00130p00115490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.03 Archaeplastida
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.03 Archaeplastida
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
GSVIVT01017810001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
Gb_28725 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os01g48370.1 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.05 Archaeplastida
Pp3c24_19540V3.1 No alias tubby like protein 3 0.05 Archaeplastida
Solyc07g062390.4.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Solyc09g074510.3.1 No alias transcription factor (TUB) 0.02 Archaeplastida
Solyc10g046970.2.1 No alias transcription factor (TUB) 0.03 Archaeplastida
AMTR_s00057p00153680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.01 LandPlants
AMTR_s00130p00115490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.03 LandPlants
AT1G25280 TLP10, AtTLP10 tubby like protein 10 0.02 LandPlants
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 LandPlants
GSVIVT01017810001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 LandPlants
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.05 LandPlants
Pp3c20_2160V3.1 No alias tubby like protein 3 0.01 LandPlants
Pp3c24_19540V3.1 No alias tubby like protein 3 0.03 LandPlants
Solyc03g033980.4.1 No alias transcription factor (TUB) 0.02 LandPlants
Solyc10g046970.2.1 No alias transcription factor (TUB) 0.03 LandPlants
AMTR_s00130p00115490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.03 SeedPlants
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000007 Tubby_C 100 353
No external refs found!