Zm00001e027034_P001


Description : transcription factor (MADS/AGL)


Gene families : OG_01_0000011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000011_tree ,
OG_02_0000008 (LandPlants) Phylogenetic Tree(s): OG_02_0000008_tree ,
OG_03_0000013 (SeedPlants) Phylogenetic Tree(s): OG_03_0000013_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e027034_P001
Cluster HCCA: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00217560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00013p00114420 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00021p00254030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00053p00228660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00071p00198970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00089p00081270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00140p00045380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AT1G24260 AGL9, SEP3 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.05 Archaeplastida
AT1G71692 XAL1, AGL12 AGAMOUS-like 12 0.02 Archaeplastida
AT2G03710 AGL3, SEP4 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.05 Archaeplastida
AT2G45650 AGL6 AGAMOUS-like 6 0.03 Archaeplastida
AT3G54340 AP3, ATAP3 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.04 Archaeplastida
AT4G09960 STK, AGL11 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT4G18960 AG K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
GSVIVT01001437001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01006592001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01008139001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01009171001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01009815001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01010521001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
GSVIVT01012249001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
GSVIVT01012250001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01018450001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01018839001 No alias Floral homeotic protein DEFICIENS OS=Antirrhinum majus 0.02 Archaeplastida
GSVIVT01021303001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
GSVIVT01027577001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01033253001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01036551001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
Gb_16301 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Gb_28337 No alias MADS-box transcription factor 6 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Gb_30604 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_38920 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_38922 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Gb_41550 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os01g10504.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
LOC_Os01g66290.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
LOC_Os02g36924.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os03g11614.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os04g52410.2 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os05g11414.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
LOC_Os06g11330.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os06g23950.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os06g23980.1 No alias MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os08g41960.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os09g32948.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
LOC_Os12g10540.3 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_15122g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc01g093960.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc02g065730.2.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc02g084630.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc04g005320.3.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc04g081000.3.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc06g064840.4.1 No alias no description available(sp|f6i457|ag11c_vitvi : 172.0) 0.03 Archaeplastida
Solyc07g055920.4.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc10g044965.1.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Solyc11g005120.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g032100.2.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc12g038510.2.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e000638_P004 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e029170_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e036159_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.03 LandPlants
AT2G03710 AGL3, SEP4 K-box region and MADS-box transcription factor family protein 0.03 LandPlants
AT2G42830 SHP2, AGL5 K-box region and MADS-box transcription factor family protein 0.05 LandPlants
AT4G18960 AG K-box region and MADS-box transcription factor family protein 0.03 LandPlants
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.02 LandPlants
GSVIVT01001437001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01006592001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01008139001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01012250001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01018450001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01021303001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01022182001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01027577001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01027579001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01033067001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01033253001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
GSVIVT01036549001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 LandPlants
GSVIVT01036551001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 LandPlants
Gb_05359 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Gb_12778 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Gb_30604 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Gb_38922 No alias transcription factor (MADS/AGL) 0.03 LandPlants
LOC_Os01g10504.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
LOC_Os01g66290.1 No alias transcription factor (MADS/AGL) 0.04 LandPlants
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.05 LandPlants
LOC_Os04g52410.2 No alias transcription factor (MADS/AGL) 0.03 LandPlants
LOC_Os05g11414.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os06g23950.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
LOC_Os09g32948.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os10g39130.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
LOC_Os12g10540.3 No alias transcription factor (MADS/AGL) 0.03 LandPlants
MA_276701g0010 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Mp4g12490.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc01g080785.1.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc01g093960.3.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc02g065730.2.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Solyc04g005320.3.1 No alias transcription factor (MADS/AGL) 0.03 LandPlants
Solyc10g044965.1.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc10g080030.2.1 No alias transcription factor (MADS/AGL) 0.02 LandPlants
Solyc11g005120.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc12g038510.2.1 No alias transcription factor (MADS/AGL) 0.05 LandPlants
AT5G20240 PI K-box region and MADS-box transcription factor family protein 0.02 SeedPlants
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.02 SeedPlants
GSVIVT01006592001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 SeedPlants
GSVIVT01008806001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.04 SeedPlants
GSVIVT01012110001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 SeedPlants
GSVIVT01026207001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 SeedPlants
GSVIVT01027579001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 SeedPlants
GSVIVT01035477001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.02 SeedPlants
Gb_12778 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Gb_30604 No alias transcription factor (MADS/AGL) 0.03 SeedPlants
Gb_38920 No alias no hits & (original description: none) 0.02 SeedPlants
Gb_38922 No alias transcription factor (MADS/AGL) 0.03 SeedPlants
LOC_Os02g07430.1 No alias transcription factor (MADS/AGL) 0.06 SeedPlants
LOC_Os04g52410.2 No alias transcription factor (MADS/AGL) 0.04 SeedPlants
LOC_Os05g34940.1 No alias transcription factor (MADS/AGL) 0.03 SeedPlants
LOC_Os10g39130.1 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
MA_10256834g0010 No alias transcription factor (MADS/AGL) 0.01 SeedPlants
MA_18942g0010 No alias transcription factor (MADS/AGL) 0.03 SeedPlants
Solyc01g106700.3.1 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Solyc03g006830.3.1 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Solyc11g005120.3.1 No alias no hits & (original description: none) 0.03 SeedPlants
Solyc12g056460.3.1 No alias transcription factor (MADS/AGL) 0.02 SeedPlants
Zm00001e000167_P005 No alias transcription factor (MADS/AGL) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 83 165
No external refs found!