AT3G19500


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_01_0000624 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000624_tree ,
OG_02_0000347 (LandPlants) Phylogenetic Tree(s): OG_02_0000347_tree ,
OG_03_0000255 (SeedPlants) Phylogenetic Tree(s): OG_03_0000255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19500
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G61660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
LOC_Os05g14010.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os08g08160.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc01g107490.2.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e005748_P002 No alias transcription factor (bHLH) 0.03 Archaeplastida
AT1G61660 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
LOC_Os08g08160.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc01g107490.2.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc03g120530.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e005748_P002 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e021661_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e039938_P002 No alias transcription factor (bHLH) 0.02 LandPlants
GSVIVT01015353001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 SeedPlants
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 SeedPlants
Zm00001e005748_P002 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e019609_P001 No alias transcription factor (bHLH) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!