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AT3G19090


Description : RNA-binding protein


Gene families : OG_01_0001518 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001518_tree ,
OG_02_0001117 (LandPlants) Phylogenetic Tree(s): OG_02_0001117_tree ,
OG_03_0000812 (SeedPlants) Phylogenetic Tree(s): OG_03_0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19090
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g01260.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c2_11250V3.1 No alias RNA-binding protein 0.03 Archaeplastida
Solyc01g108310.4.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g070550.3.1 No alias La-related protein 6A OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g050550.3.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc12g096640.3.1 No alias La-related protein 6B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e004312_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e032645_P001 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os07g01260.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.04 LandPlants
Pp3c2_11250V3.1 No alias RNA-binding protein 0.02 LandPlants
Solyc01g108310.4.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.04 LandPlants
Solyc02g070550.3.1 No alias La-related protein 6A OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc10g050550.3.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc12g096640.3.1 No alias La-related protein 6B OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e004312_P002 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e032645_P001 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.04 LandPlants
LOC_Os03g36900.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.02 SeedPlants
LOC_Os07g01260.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.04 SeedPlants
Solyc01g108310.4.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.03 SeedPlants
Solyc02g070550.3.1 No alias La-related protein 6A OS=Arabidopsis thaliana... 0.03 SeedPlants
Solyc10g050550.3.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.02 SeedPlants
Zm00001e004312_P002 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e032645_P001 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 241 309
IPR009818 Ataxin-2_C 33 47
IPR006630 La_HTH 148 205
No external refs found!