AT3G19020


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG_01_0000279 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000279_tree ,
OG_02_0000206 (LandPlants) Phylogenetic Tree(s): OG_02_0000206_tree ,
OG_03_0000158 (SeedPlants) Phylogenetic Tree(s): OG_03_0000158_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19020
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.03 Archaeplastida
AMTR_s00029p00242570 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.07 Archaeplastida
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.04 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.05 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.08 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.04 Archaeplastida
Gb_27021 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os01g25460.1 No alias LRR-domain extensin 0.09 Archaeplastida
LOC_Os04g57430.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os12g35710.1 No alias LRR-domain extensin 0.05 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.06 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.07 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.08 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Solyc01g108900.4.1 No alias LRR-domain extensin 0.04 Archaeplastida
Solyc12g006980.2.1 No alias LRR-domain extensin 0.05 Archaeplastida
Solyc12g088950.3.1 No alias Pollen-specific leucine-rich repeat extensin-like... 0.04 Archaeplastida
Zm00001e017627_P001 No alias Pollen-specific leucine-rich repeat extensin-like... 0.05 Archaeplastida
Zm00001e022985_P003 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.04 LandPlants
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.05 LandPlants
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.07 LandPlants
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 LandPlants
Gb_26318 No alias LRR-domain extensin 0.04 LandPlants
Gb_27021 No alias LRR-domain extensin 0.03 LandPlants
LOC_Os01g25460.1 No alias LRR-domain extensin 0.09 LandPlants
LOC_Os05g08770.2 No alias LRR-domain extensin 0.03 LandPlants
LOC_Os12g35710.1 No alias LRR-domain extensin 0.05 LandPlants
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.01 LandPlants
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.04 LandPlants
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.04 LandPlants
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.04 LandPlants
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 LandPlants
Solyc01g108900.4.1 No alias LRR-domain extensin 0.04 LandPlants
Solyc12g006980.2.1 No alias LRR-domain extensin 0.05 LandPlants
Solyc12g088950.3.1 No alias Pollen-specific leucine-rich repeat extensin-like... 0.04 LandPlants
Zm00001e017627_P001 No alias Pollen-specific leucine-rich repeat extensin-like... 0.05 LandPlants
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.03 SeedPlants
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.04 SeedPlants
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.05 SeedPlants
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.07 SeedPlants
Gb_27021 No alias LRR-domain extensin 0.02 SeedPlants
LOC_Os01g25460.1 No alias LRR-domain extensin 0.07 SeedPlants
LOC_Os05g08770.2 No alias LRR-domain extensin 0.03 SeedPlants
LOC_Os12g35710.1 No alias LRR-domain extensin 0.05 SeedPlants
Solyc12g006980.2.1 No alias LRR-domain extensin 0.03 SeedPlants
Zm00001e017627_P001 No alias Pollen-specific leucine-rich repeat extensin-like... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009860 pollen tube growth RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!