AMTR_s00010p00252990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.370

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0008963 (LandPlants) Phylogenetic Tree(s): OG_02_0008963_tree ,
OG_03_0007949 (SeedPlants) Phylogenetic Tree(s): OG_03_0007949_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00252990
Cluster HCCA: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.02 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT2G39880 AtMYB25, MYB25 myb domain protein 25 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.04 Archaeplastida
AT3G18100 MYB4R1, AtMYB4R1 myb domain protein 4r1 0.03 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.02 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.06 Archaeplastida
AT4G25560 AtMYB18, MYB18 myb domain protein 18 0.02 Archaeplastida
AT4G38620 ATMYB4, MYB4 myb domain protein 4 0.01 Archaeplastida
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.07 Archaeplastida
AT5G49620 AtMYB78, MYB78 myb domain protein 78 0.02 Archaeplastida
AT5G54230 MYB49, AtMYB49 myb domain protein 49 0.02 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.02 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.03 Archaeplastida
Cpa|evm.model.tig00020780.48 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013735001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015102001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01015370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028091001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032467001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035663001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_17134 No alias Transcription factor MYB3R-1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_29520 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_39081 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g12860.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g36730.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g13570.1 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_605711g0010 No alias Transcription factor MYB3R-4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_8626g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g08640.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g17210.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c10_10240V3.1 No alias Homeodomain-like protein 0.03 Archaeplastida
Pp3c15_24080V3.1 No alias myb domain protein 33 0.03 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c9_24170V3.1 No alias myb domain protein 33 0.02 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g080580.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008390.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc11g071300.2.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e001341_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e004115_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e014203_P004 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016403_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e028886_P003 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e031356_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e040265_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.02 LandPlants
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.02 LandPlants
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.02 SeedPlants
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!