AT3G18820 (ATRAB7B, RAB7B,...)


Description : RAB GTPase homolog G3F

Gene families : OG_01_0001137 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001137_tree ,
OG_02_0000971 (LandPlants) Phylogenetic Tree(s): OG_02_0000971_tree ,
OG_03_0000847 (SeedPlants) Phylogenetic Tree(s): OG_03_0000847_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AT3G18820
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
MA_18050g0020 No alias Ras-related protein Rab7 OS=Gossypium hirsutum... 0.03 Archaeplastida
Mp8g13820.1 No alias G-class RAB GTPase 0.06 Archaeplastida
Mp8g13820.1 No alias G-class RAB GTPase 0.06 LandPlants
Pp3c1_12070V3.1 No alias RAB GTPase homolog G3D 0.02 LandPlants
LOC_Os01g12730.1 No alias G-class RAB GTPase 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006457 protein folding RCA Interproscan
BP GO:0007030 Golgi organization RCA Interproscan
BP GO:0007033 vacuole organization RCA Interproscan
BP GO:0009408 response to heat RCA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
BP GO:0034976 response to endoplasmic reticulum stress RCA Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
BP GO:0048767 root hair elongation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 177
No external refs found!