Zm00001e025656_P001


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e025656_P001
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00265010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00066p00183410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.03 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.06 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.03 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.03 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.04 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.05 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.02 Archaeplastida
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01028516001 No alias External stimuli response.light.red/far red light.PIF... 0.02 Archaeplastida
Gb_07156 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
Gb_30839 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.1 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.14 Archaeplastida
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
LOC_Os06g10820.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g05010.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os11g41640.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.12 Archaeplastida
LOC_Os12g40730.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10156436g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_29441g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
Pp3c17_21890V3.1 No alias phytochrome interacting factor 3 0.02 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c3_28970V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Smo409967 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Smo413232 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Solyc01g102300.3.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.12 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.09 Archaeplastida
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e018003_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e040380_P002 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
AMTR_s00008p00265010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.06 LandPlants
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.02 LandPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.04 LandPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.02 LandPlants
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
GSVIVT01030846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 LandPlants
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.09 LandPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.14 LandPlants
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.07 LandPlants
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os11g41640.1 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.12 LandPlants
MA_100071g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_10156436g0010 No alias transcription factor (bHLH) 0.02 LandPlants
MA_88831g0010 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c3_28970V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Smo409967 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
Smo413232 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.07 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.1 LandPlants
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.08 LandPlants
Solyc10g049780.1.1 No alias transcription factor (bHLH) 0.01 LandPlants
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.06 LandPlants
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e018003_P001 No alias transcription factor (bHLH) 0.03 LandPlants
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.01 SeedPlants
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 SeedPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.03 SeedPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 SeedPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.02 SeedPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.05 SeedPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.1 SeedPlants
LOC_Os03g42100.1 No alias transcription factor (bHLH) 0.06 SeedPlants
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.01 SeedPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.1 SeedPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.04 SeedPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.06 SeedPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.04 SeedPlants
Solyc10g049780.1.1 No alias transcription factor (bHLH) 0.01 SeedPlants
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e018003_P001 No alias transcription factor (bHLH) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 244 284
No external refs found!