AT3G18480 (CASP, AtCASP)


Aliases : CASP, AtCASP

Description : CCAAT-displacement protein alternatively spliced product


Gene families : OG_01_0003849 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003849_tree ,
OG_02_0004723 (LandPlants) Phylogenetic Tree(s): OG_02_0004723_tree ,
OG_03_0007543 (SeedPlants) Phylogenetic Tree(s): OG_03_0007543_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18480
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
Cre04.g223900 No alias No description available 0.03 Archaeplastida
Cre08.g382650 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.04 Archaeplastida
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 Archaeplastida
LOC_Os03g50300.1 No alias golgin (CASP) 0.03 Archaeplastida
MA_10428127g0010 No alias golgin (CASP) 0.03 Archaeplastida
Mp6g21020.1 No alias golgin (CASP) 0.02 Archaeplastida
Pp3c25_10040V3.1 No alias CCAAT-displacement protein alternatively spliced product 0.05 Archaeplastida
Solyc06g069210.3.1 No alias golgin (CASP) 0.09 Archaeplastida
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 LandPlants
LOC_Os03g50300.1 No alias golgin (CASP) 0.03 LandPlants
MA_10428127g0010 No alias golgin (CASP) 0.03 LandPlants
Mp6g21020.1 No alias golgin (CASP) 0.02 LandPlants
Pp3c25_10040V3.1 No alias CCAAT-displacement protein alternatively spliced product 0.05 LandPlants
Solyc06g069210.3.1 No alias golgin (CASP) 0.07 LandPlants
GSVIVT01008258001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 SeedPlants
LOC_Os03g50300.1 No alias golgin (CASP) 0.03 SeedPlants
MA_10428127g0010 No alias golgin (CASP) 0.03 SeedPlants
Solyc06g069210.3.1 No alias golgin (CASP) 0.07 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
CC GO:0016021 integral component of membrane IDA Interproscan
BP GO:0030244 cellulose biosynthetic process RCA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012955 CASP_C 439 665
No external refs found!