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  5. Zm00001e023883_P001

Zm00001e023883_P001


Description : Pentatricopeptide repeat-containing protein PPR5, chloroplastic OS=Zea mays (sp|a7ln87|ppr5_maize : 900.0)


Gene families : OG_01_0000306 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000306_tree ,
OG_02_0007143 (LandPlants) Phylogenetic Tree(s): OG_02_0007143_tree ,
OG_03_0009674 (SeedPlants) Phylogenetic Tree(s): OG_03_0009674_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e023883_P001
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00203740 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39620,... 0.03 Archaeplastida
AMTR_s00025p00175980 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g48730,... 0.02 Archaeplastida
AT3G06430 EMB2750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
AT3G53170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT4G39620 EMB2453, ATPPR5 Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 Archaeplastida
AT5G48730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00001623.10 No alias Pentatricopeptide repeat-containing protein At5g04810,... 0.02 Archaeplastida
GSVIVT01017677001 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.11 Archaeplastida
GSVIVT01022204001 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.06 Archaeplastida
GSVIVT01028689001 No alias Pentatricopeptide repeat-containing protein At5g48730,... 0.04 Archaeplastida
GSVIVT01032162001 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.03 Archaeplastida
GSVIVT01038096001 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.05 Archaeplastida
Gb_00230 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.11 Archaeplastida
Gb_18843 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.05 Archaeplastida
Gb_36199 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.07 Archaeplastida
Gb_37344 No alias Pentatricopeptide repeat-containing protein At5g48730,... 0.03 Archaeplastida
Gb_38049 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.05 Archaeplastida
LOC_Os03g02430.1 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.05 Archaeplastida
LOC_Os06g07550.1 No alias Pentatricopeptide repeat-containing protein At5g48730,... 0.03 Archaeplastida
MA_10431478g0010 No alias Pentatricopeptide repeat-containing protein At5g48730,... 0.02 Archaeplastida
MA_12518g0010 No alias Pentatricopeptide repeat-containing protein PPR5... 0.02 Archaeplastida
MA_793801g0010 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.03 Archaeplastida
Mp1g15120.1 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.07 Archaeplastida
Pp3c20_15110V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Pp3c8_13830V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Pp3c8_4580V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
Smo119487 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.02 Archaeplastida
Smo135826 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.03 Archaeplastida
Solyc01g006500.4.1 No alias Pentatricopeptide repeat-containing protein At5g48730,... 0.06 Archaeplastida
Solyc01g057200.4.1 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.09 Archaeplastida
Solyc04g054270.4.1 No alias Pentatricopeptide repeat-containing protein PPR5... 0.1 Archaeplastida
Solyc08g045780.4.1 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.05 Archaeplastida
Solyc12g098990.2.1 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.09 Archaeplastida
AT4G39620 EMB2453, ATPPR5 Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 LandPlants
GSVIVT01022204001 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.04 LandPlants
Gb_36199 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.05 LandPlants
MA_12518g0010 No alias Pentatricopeptide repeat-containing protein PPR5... 0.01 LandPlants
Pp3c8_4580V3.1 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
Solyc04g054270.4.1 No alias Pentatricopeptide repeat-containing protein PPR5... 0.08 LandPlants
AT4G39620 EMB2453, ATPPR5 Tetratricopeptide repeat (TPR)-like superfamily protein 0.1 SeedPlants
GSVIVT01022204001 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.03 SeedPlants
Gb_36199 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.04 SeedPlants
MA_12518g0010 No alias Pentatricopeptide repeat-containing protein PPR5... 0.01 SeedPlants
Solyc04g054270.4.1 No alias Pentatricopeptide repeat-containing protein PPR5... 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 306 335
IPR002885 Pentatricopeptide_repeat 126 155
IPR002885 Pentatricopeptide_repeat 157 210
IPR002885 Pentatricopeptide_repeat 232 279
IPR002885 Pentatricopeptide_repeat 396 444
No external refs found!