AT3G17100


Description : sequence-specific DNA binding transcription factors


Gene families : OG_01_0001291 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001291_tree ,
OG_02_0000813 (LandPlants) Phylogenetic Tree(s): OG_02_0000813_tree ,
OG_03_0000680 (SeedPlants) Phylogenetic Tree(s): OG_03_0000680_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17100
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00155460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
LOC_Os03g19780.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_114710g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_136890g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_29054g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_7709601g0010 No alias No annotation 0.02 Archaeplastida
Zm00001e001479_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00005p00155460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
LOC_Os03g19780.1 No alias transcription factor (bHLH) 0.03 LandPlants
MA_136890g0010 No alias transcription factor (bHLH) 0.02 LandPlants
MA_29054g0010 No alias transcription factor (bHLH) 0.03 LandPlants
MA_7709601g0010 No alias No annotation 0.02 LandPlants
MA_124662g0010 No alias transcription factor (bHLH) 0.02 SeedPlants
MA_7709601g0010 No alias No annotation 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0006598 polyamine catabolic process RCA Interproscan
BP GO:0009698 phenylpropanoid metabolic process RCA Interproscan
BP GO:0009741 response to brassinosteroid RCA Interproscan
BP GO:0042398 cellular modified amino acid biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!