Zm00001e023326_P001


Description : transcription factor (TUB)


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0000295 (LandPlants) Phylogenetic Tree(s): OG_02_0000295_tree ,
OG_03_0000341 (SeedPlants) Phylogenetic Tree(s): OG_03_0000341_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e023326_P001
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.03 Archaeplastida
Cre12.g520650 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
GSVIVT01009728001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
GSVIVT01010999001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
GSVIVT01018940001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
Gb_22686 No alias transcription factor (TUB) 0.02 Archaeplastida
Gb_38151 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os01g48370.1 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.1 Archaeplastida
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.01 Archaeplastida
LOC_Os12g06630.2 No alias transcription factor (TUB) 0.02 Archaeplastida
MA_1119893g0010 No alias transcription factor (TUB) 0.02 Archaeplastida
MA_1156928g0010 No alias transcription factor (TUB) 0.02 Archaeplastida
MA_169150g0010 No alias transcription factor (TUB) 0.03 Archaeplastida
Mp6g12440.1 No alias transcription factor (TUB) 0.02 Archaeplastida
Pp3c20_2160V3.1 No alias tubby like protein 3 0.02 Archaeplastida
Pp3c23_17770V3.1 No alias tubby like protein 3 0.03 Archaeplastida
Smo230435 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
Smo83983 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 Archaeplastida
Smo85745 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 Archaeplastida
Solyc02g085130.4.1 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e016851_P001 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e019166_P001 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e024653_P002 No alias transcription factor (TUB) 0.02 Archaeplastida
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.02 LandPlants
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.02 LandPlants
Gb_36456 No alias transcription factor (TUB) 0.01 LandPlants
Gb_38151 No alias transcription factor (TUB) 0.02 LandPlants
LOC_Os01g48370.1 No alias transcription factor (TUB) 0.02 LandPlants
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.09 LandPlants
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.01 LandPlants
MA_169150g0010 No alias transcription factor (TUB) 0.02 LandPlants
Pp3c20_2160V3.1 No alias tubby like protein 3 0.02 LandPlants
Pp3c23_17770V3.1 No alias tubby like protein 3 0.02 LandPlants
Smo83983 No alias RNA biosynthesis.transcriptional activation.TUB... 0.02 LandPlants
Solyc02g085130.4.1 No alias transcription factor (TUB) 0.02 LandPlants
Zm00001e024653_P002 No alias transcription factor (TUB) 0.02 LandPlants
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.02 SeedPlants
Gb_36456 No alias transcription factor (TUB) 0.01 SeedPlants
Gb_38151 No alias transcription factor (TUB) 0.02 SeedPlants
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.08 SeedPlants
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.01 SeedPlants
MA_10430830g0020 No alias transcription factor (TUB) 0.01 SeedPlants
Solyc02g085130.4.1 No alias transcription factor (TUB) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000007 Tubby_C 138 431
IPR001810 F-box_dom 75 125
No external refs found!