AT3G16010


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_01_0007620 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007620_tree ,
OG_02_0006283 (LandPlants) Phylogenetic Tree(s): OG_02_0006283_tree ,
OG_03_0005058 (SeedPlants) Phylogenetic Tree(s): OG_03_0005058_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G16010
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Gb_20376 No alias group-II intron mitochondrial splicing factor (MISF68) 0.06 Archaeplastida
Mp1g09820.1 No alias Pentatricopeptide repeat-containing protein At3g16010... 0.01 Archaeplastida
Smo81759 No alias Pentatricopeptide repeat-containing protein At5g39710... 0.04 Archaeplastida
AMTR_s00045p00211840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g16010... 0.03 LandPlants
Gb_20376 No alias group-II intron mitochondrial splicing factor (MISF68) 0.05 LandPlants
Mp1g09820.1 No alias Pentatricopeptide repeat-containing protein At3g16010... 0.01 LandPlants
AMTR_s00045p00211840 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g16010... 0.03 SeedPlants
Gb_20376 No alias group-II intron mitochondrial splicing factor (MISF68) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 341 365
IPR002885 Pentatricopeptide_repeat 446 473
IPR002885 Pentatricopeptide_repeat 198 227
IPR002885 Pentatricopeptide_repeat 481 509
IPR002885 Pentatricopeptide_repeat 229 260
IPR002885 Pentatricopeptide_repeat 269 314
IPR002885 Pentatricopeptide_repeat 512 561
IPR002885 Pentatricopeptide_repeat 582 629
IPR002885 Pentatricopeptide_repeat 371 421
No external refs found!