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  5. Cre16.g676197

Cre16.g676197


Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom encoding the RPN subunits of the 26S proteasome 26S proteasome regulatory subunit S2 1A (RPN1A)


Gene families : OG_01_0003258 (Gene family) Phylogenetic Tree(s): OG0003258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre16.g676197
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT2G20580 RPN1A, ATRPN1A 26S proteasome regulatory subunit S2 1A 0.05 Gene family
AT4G28470 RPN1B, ATRPN1B 26S proteasome regulatory subunit S2 1B 0.01 Gene family
Cpa|evm.model.tig00020703.10 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
GSVIVT01020602001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
LOC_Os02g05340 Os02g0146700 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.09 Gene family
MA_6189g0010 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.02 Gene family
Smo228162 PACid_15405379 No description available 0.04 Gene family
Solyc07g053650.3.1 Solyc07g053650.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.06 Gene family
Zm00001d015259 GRMZM2G314233,... 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.07 Gene family
Zm00001d053881 GRMZM2G155384 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.07 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002015 Proteasome/cyclosome_rpt 484 515
No external refs found!