AMTR_s00010p00246330 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00010.333

Description : Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor


Gene families : OG_01_0001646 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001646_tree ,
OG_02_0007031 (LandPlants) Phylogenetic Tree(s): OG_02_0007031_tree ,
OG_03_0007471 (SeedPlants) Phylogenetic Tree(s): OG_03_0007471_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00010p00246330
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AT1G45332 No alias Translation elongation factor EFG/EF2 protein 0.04 Archaeplastida
Cpa|evm.model.tig00000144.55 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Cpa|evm.model.tig00000144.56 No alias Elongation factor G-1, mitochondrial OS=Arabidopsis thaliana 0.03 Archaeplastida
Cre11.g467553 No alias Elongation factor G, mitochondrial OS=Oryza sativa... 0.03 Archaeplastida
GSVIVT01018186001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Gb_36066 No alias EF-G translation elongation factor 0.02 Archaeplastida
LOC_Os03g36780.1 No alias EF-G translation elongation factor 0.03 Archaeplastida
Mp7g06620.1 No alias EF-G translation elongation factor 0.02 Archaeplastida
Pp3c19_15980V3.1 No alias Translation elongation factor EFG/EF2 protein 0.02 Archaeplastida
Pp3c22_17180V3.1 No alias Translation elongation factor EFG/EF2 protein 0.05 Archaeplastida
Smo141453 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
AT1G45332 No alias Translation elongation factor EFG/EF2 protein 0.03 LandPlants
GSVIVT01018186001 No alias Protein biosynthesis.organelle translation... 0.04 LandPlants
LOC_Os03g36780.1 No alias EF-G translation elongation factor 0.02 LandPlants
Pp3c19_15980V3.1 No alias Translation elongation factor EFG/EF2 protein 0.02 LandPlants
Pp3c22_17180V3.1 No alias Translation elongation factor EFG/EF2 protein 0.05 LandPlants
Smo141453 No alias Protein biosynthesis.organelle translation... 0.02 LandPlants
AT1G45332 No alias Translation elongation factor EFG/EF2 protein 0.03 SeedPlants
GSVIVT01018186001 No alias Protein biosynthesis.organelle translation... 0.04 SeedPlants
LOC_Os03g36780.1 No alias EF-G translation elongation factor 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 76 349
IPR004161 EFTu-like_2 391 457
IPR000640 EFG_V-like 668 754
IPR005517 Transl_elong_EFG/EF2_IV 545 666
No external refs found!