AT3G15360 (ATHM4, TRX-M4, ATM4)

Aliases : ATHM4, TRX-M4, ATM4

Description : thioredoxin M-type 4

Gene families : OG_01_0000516 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000516_tree ,
OG_02_0000996 (LandPlants) Phylogenetic Tree(s): OG_02_0000996_tree ,
OG_03_0001150 (SeedPlants) Phylogenetic Tree(s): OG_03_0001150_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G15360
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00016000	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.15	Archaeplastida
Cpa\|evm.model.tig00020563.189	No alias	No description available	0.01	Archaeplastida
GSVIVT01010012001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.11	Archaeplastida
GSVIVT01014360001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.15	Archaeplastida
GSVIVT01026149001	No alias	Redox homeostasis.chloroplast redox homeostasis.X-type...	0.11	Archaeplastida
GSVIVT01034548001	No alias	Redox homeostasis.chloroplast redox homeostasis.Y-type...	0.1	Archaeplastida
Gb_00914	No alias	M-type thioredoxin	0.08	Archaeplastida
Gb_31181	No alias	M-type thioredoxin	0.05	Archaeplastida
Gb_37068	No alias	no hits & (original description: none)	0.11	Archaeplastida
LOC_Os04g57930.1	No alias	X-type thioredoxin	0.12	Archaeplastida
LOC_Os12g08730.1	No alias	M-type thioredoxin	0.12	Archaeplastida
MA_10433314g0010	No alias	X-type thioredoxin	0.04	Archaeplastida
Mp4g18950.1	No alias	M-type thioredoxin	0.18	Archaeplastida
Pp3c24_4980V3.1	No alias	thioredoxin X	0.14	Archaeplastida
Pp3c25_2880V3.1	No alias	thioredoxin M-type 1	0.13	Archaeplastida
Pp3c5_23070V3.1	No alias	thioredoxin M-type 1	0.12	Archaeplastida
Pp3c6_10040V3.1	No alias	Thioredoxin superfamily protein	0.18	Archaeplastida
Pp3c6_10090V3.1	No alias	thioredoxin M-type 1	0.03	Archaeplastida
Smo230724	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.03	Archaeplastida
Solyc01g008250.3.1	No alias	X-type thioredoxin	0.14	Archaeplastida
Solyc07g063190.3.1	No alias	M-type thioredoxin	0.13	Archaeplastida
Solyc10g006970.3.1	No alias	M-type thioredoxin	0.13	Archaeplastida
Solyc12g013810.2.1	No alias	M-type thioredoxin	0.22	Archaeplastida
Zm00001e006545_P001	No alias	no hits & (original description: none)	0.13	Archaeplastida
Zm00001e018385_P001	No alias	M-type thioredoxin	0.13	Archaeplastida
Zm00001e039586_P001	No alias	M-type thioredoxin	0.15	Archaeplastida
AMTR_s00017p00209370	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.02	LandPlants
AMTR_s00071p00016000	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.13	LandPlants
GSVIVT01010012001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.09	LandPlants
GSVIVT01014360001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.12	LandPlants
Gb_00914	No alias	M-type thioredoxin	0.08	LandPlants
Gb_31181	No alias	M-type thioredoxin	0.05	LandPlants
LOC_Os12g08730.1	No alias	M-type thioredoxin	0.11	LandPlants
MA_474303g0010	No alias	M-type thioredoxin	0.02	LandPlants
Mp4g18950.1	No alias	M-type thioredoxin	0.17	LandPlants
Pp3c25_2880V3.1	No alias	thioredoxin M-type 1	0.13	LandPlants
Pp3c5_23070V3.1	No alias	thioredoxin M-type 1	0.13	LandPlants
Pp3c6_10040V3.1	No alias	Thioredoxin superfamily protein	0.17	LandPlants
Pp3c6_10090V3.1	No alias	thioredoxin M-type 1	0.02	LandPlants
Smo230724	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.03	LandPlants
Solyc07g063190.3.1	No alias	M-type thioredoxin	0.12	LandPlants
Solyc10g006970.3.1	No alias	M-type thioredoxin	0.13	LandPlants
Solyc12g013810.2.1	No alias	M-type thioredoxin	0.23	LandPlants
Zm00001e018385_P001	No alias	M-type thioredoxin	0.11	LandPlants
Zm00001e039586_P001	No alias	M-type thioredoxin	0.14	LandPlants
AMTR_s00017p00209370	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.02	SeedPlants
AMTR_s00071p00016000	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.13	SeedPlants
GSVIVT01010012001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.09	SeedPlants
GSVIVT01014360001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.11	SeedPlants
Gb_00914	No alias	M-type thioredoxin	0.08	SeedPlants
Gb_31181	No alias	M-type thioredoxin	0.05	SeedPlants
LOC_Os12g08730.1	No alias	M-type thioredoxin	0.1	SeedPlants
MA_474303g0010	No alias	M-type thioredoxin	0.02	SeedPlants
Solyc07g063190.3.1	No alias	M-type thioredoxin	0.12	SeedPlants
Solyc10g006970.3.1	No alias	M-type thioredoxin	0.13	SeedPlants
Solyc12g013810.2.1	No alias	M-type thioredoxin	0.23	SeedPlants
Zm00001e018385_P001	No alias	M-type thioredoxin	0.11	SeedPlants
Zm00001e039586_P001	No alias	M-type thioredoxin	0.14	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	RCA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004857	enzyme inhibitor activity	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006109	regulation of carbohydrate metabolic process	IDA	Interproscan
BP	GO:0006520	cellular amino acid metabolic process	None	Extended
BP	GO:0006568	tryptophan metabolic process	None	Extended
BP	GO:0006569	tryptophan catabolic process	RCA	Interproscan
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006586	indolalkylamine metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	IGI	Interproscan
MF	GO:0008047	enzyme activator activity	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009063	cellular amino acid catabolic process	None	Extended
BP	GO:0009072	aromatic amino acid family metabolic process	None	Extended
BP	GO:0009074	aromatic amino acid family catabolic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009310	amine catabolic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009668	plastid membrane organization	None	Extended
BP	GO:0009683	indoleacetic acid metabolic process	None	Extended
BP	GO:0009684	indoleacetic acid biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009850	auxin metabolic process	None	Extended
BP	GO:0009851	auxin biosynthetic process	None	Extended
BP	GO:0009853	photorespiration	RCA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010817	regulation of hormone levels	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019252	starch biosynthetic process	RCA	Interproscan
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034754	cellular hormone metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042402	cellular biogenic amine catabolic process	None	Extended
BP	GO:0042430	indole-containing compound metabolic process	None	Extended
BP	GO:0042435	indole-containing compound biosynthetic process	None	Extended
BP	GO:0042436	indole-containing compound catabolic process	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
BP	GO:0042446	hormone biosynthetic process	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	IDA	Interproscan
BP	GO:0043085	positive regulation of catalytic activity	RCA	Interproscan
BP	GO:0043086	negative regulation of catalytic activity	IDA	Interproscan
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046218	indolalkylamine catabolic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901606	alpha-amino acid catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013766	Thioredoxin_domain	88	188

External Links

No external refs found!

AT3G15360 (ATHM4, TRX-M4, ATM4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation