AT3G14100


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0002141 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002141_tree ,
OG_02_0002492 (LandPlants) Phylogenetic Tree(s): OG_02_0002492_tree ,
OG_03_0002145 (SeedPlants) Phylogenetic Tree(s): OG_03_0002145_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G14100
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00204100 evm_27.TU.AmTr_v1... Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.03 Archaeplastida
MA_10428336g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g063000.3.1 No alias mRNA-binding regulatory factor (UBP1) 0.03 Archaeplastida
AMTR_s00025p00204100 evm_27.TU.AmTr_v1... Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia 0.03 LandPlants
Solyc06g063000.3.1 No alias mRNA-binding regulatory factor (UBP1) 0.03 LandPlants
Zm00001e021159_P001 No alias mRNA-binding regulatory factor (UBP1) 0.02 LandPlants
Solyc06g063000.3.1 No alias mRNA-binding regulatory factor (UBP1) 0.03 SeedPlants
Solyc07g042180.4.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e021159_P001 No alias mRNA-binding regulatory factor (UBP1) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003730 mRNA 3'-UTR binding ISS Interproscan
BP GO:0006007 glucose catabolic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 267 324
IPR000504 RRM_dom 146 216
IPR000504 RRM_dom 61 127
No external refs found!