Zm00001e020088_P001


Description : HCF152 plastidial RNA transcript stability factor


Gene families : OG_01_0001060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001060_tree ,
OG_02_0004955 (LandPlants) Phylogenetic Tree(s): OG_02_0004955_tree ,
OG_03_0006068 (SeedPlants) Phylogenetic Tree(s): OG_03_0006068_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e020088_P001
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00179800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g17616... 0.02 Archaeplastida
AMTR_s00002p00272000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g03100,... 0.02 Archaeplastida
AT3G09650 CRM3, HCF152 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Gb_16885 No alias HCF152 plastidial RNA transcript stability factor 0.02 Archaeplastida
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.02 Archaeplastida
Mp1g13160.1 No alias HCF152 plastidial RNA transcript stability factor 0.02 Archaeplastida
Smo82002 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
Solyc09g007320.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g13160.1 No alias HCF152 plastidial RNA transcript stability factor 0.02 LandPlants
Smo82002 No alias RNA processing.organelle machineries.RNA... 0.02 LandPlants
Solyc09g007320.4.1 No alias no hits & (original description: none) 0.02 LandPlants
GSVIVT01025536001 No alias RNA processing.organelle machineries.RNA... 0.02 SeedPlants
Solyc09g007320.4.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR033443 PPR_long 224 322
IPR002885 Pentatricopeptide_repeat 415 443
IPR002885 Pentatricopeptide_repeat 511 551
IPR002885 Pentatricopeptide_repeat 559 604
IPR002885 Pentatricopeptide_repeat 451 498
IPR002885 Pentatricopeptide_repeat 379 405
No external refs found!