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  5. Zm00001e020088_P001

Zm00001e020088_P001


Description : HCF152 plastidial RNA transcript stability factor


Gene families : OG_01_0001060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001060_tree ,
OG_02_0004955 (LandPlants) Phylogenetic Tree(s): OG_02_0004955_tree ,
OG_03_0006068 (SeedPlants) Phylogenetic Tree(s): OG_03_0006068_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e020088_P001
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00179800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g17616... 0.02 Archaeplastida
AMTR_s00002p00272000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g03100,... 0.02 Archaeplastida
AT3G09650 CRM3, HCF152 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Gb_16885 No alias HCF152 plastidial RNA transcript stability factor 0.02 Archaeplastida
MA_743669g0010 No alias Pentatricopeptide repeat-containing protein At1g03100,... 0.02 Archaeplastida
Mp1g13160.1 No alias HCF152 plastidial RNA transcript stability factor 0.02 Archaeplastida
Smo82002 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
Solyc09g007320.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g13160.1 No alias HCF152 plastidial RNA transcript stability factor 0.02 LandPlants
Smo82002 No alias RNA processing.organelle machineries.RNA... 0.02 LandPlants
Solyc09g007320.4.1 No alias no hits & (original description: none) 0.02 LandPlants
GSVIVT01025536001 No alias RNA processing.organelle machineries.RNA... 0.02 SeedPlants
Solyc09g007320.4.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR033443 PPR_long 224 322
IPR002885 Pentatricopeptide_repeat 415 443
IPR002885 Pentatricopeptide_repeat 511 551
IPR002885 Pentatricopeptide_repeat 559 604
IPR002885 Pentatricopeptide_repeat 451 498
IPR002885 Pentatricopeptide_repeat 379 405
No external refs found!