Zm00001e019166_P001


Description : transcription factor (TUB)


Gene families : OG_01_0000335 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000335_tree ,
OG_02_0000295 (LandPlants) Phylogenetic Tree(s): OG_02_0000295_tree ,
OG_03_0000341 (SeedPlants) Phylogenetic Tree(s): OG_03_0000341_tree

Sequence : coding (download), protein (download)

No expression profile available


Type Description Actions
Neighborhood HRR: Zm00001e019166_P001
Cluster HCCA: Cluster_334

Target Alias Description ECC score Gene Family Method Actions
AT1G25280 TLP10, AtTLP10 tubby like protein 10 0.03 Archaeplastida
AT5G18680 AtTLP11, TLP11 tubby like protein 11 0.02 Archaeplastida
GSVIVT01010999001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 Archaeplastida
GSVIVT01029701001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.06 Archaeplastida
LOC_Os01g64700.2 No alias transcription factor (TUB) 0.05 Archaeplastida
LOC_Os02g47640.1 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os03g22800.1 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os05g36190.1 No alias transcription factor (TUB) 0.04 Archaeplastida
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.02 Archaeplastida
LOC_Os08g01290.5 No alias transcription factor (TUB) 0.03 Archaeplastida
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.01 Archaeplastida
MA_103920g0010 No alias transcription factor (TUB) 0.02 Archaeplastida
Pp3c23_17770V3.1 No alias tubby like protein 3 0.02 Archaeplastida
Pp3c24_19540V3.1 No alias tubby like protein 3 0.01 Archaeplastida
Pp3c8_18450V3.1 No alias tubby like protein 3 0.02 Archaeplastida
Solyc01g104670.3.1 No alias transcription factor (TUB) 0.02 Archaeplastida
Solyc02g085130.4.1 No alias transcription factor (TUB) 0.04 Archaeplastida
Solyc10g046970.2.1 No alias transcription factor (TUB) 0.07 Archaeplastida
Zm00001e016851_P001 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e023326_P001 No alias transcription factor (TUB) 0.03 Archaeplastida
Zm00001e032131_P001 No alias transcription factor (TUB) 0.02 Archaeplastida
AT1G25280 TLP10, AtTLP10 tubby like protein 10 0.03 LandPlants
GSVIVT01018940001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.01 LandPlants
GSVIVT01029701001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 LandPlants
Gb_22686 No alias transcription factor (TUB) 0.01 LandPlants
LOC_Os01g64700.2 No alias transcription factor (TUB) 0.04 LandPlants
LOC_Os03g22800.1 No alias transcription factor (TUB) 0.02 LandPlants
LOC_Os05g36190.1 No alias transcription factor (TUB) 0.03 LandPlants
LOC_Os05g48670.1 No alias transcription factor (TUB) 0.02 LandPlants
LOC_Os08g01290.5 No alias transcription factor (TUB) 0.03 LandPlants
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.01 LandPlants
Pp3c23_17890V3.1 No alias tubby like protein 3 0.01 LandPlants
Pp3c24_19540V3.1 No alias tubby like protein 3 0.01 LandPlants
Solyc01g067680.3.1 No alias transcription factor (TUB) 0.02 LandPlants
Solyc01g104670.3.1 No alias transcription factor (TUB) 0.02 LandPlants
Solyc10g046970.2.1 No alias transcription factor (TUB) 0.04 LandPlants
AMTR_s00040p00040910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TUB... 0.02 SeedPlants
AT1G25280 TLP10, AtTLP10 tubby like protein 10 0.03 SeedPlants
GSVIVT01018940001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.01 SeedPlants
GSVIVT01029701001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.04 SeedPlants
LOC_Os01g64700.2 No alias transcription factor (TUB) 0.04 SeedPlants
LOC_Os03g22800.1 No alias transcription factor (TUB) 0.02 SeedPlants
LOC_Os05g36190.1 No alias transcription factor (TUB) 0.03 SeedPlants
LOC_Os08g01290.5 No alias transcription factor (TUB) 0.02 SeedPlants
LOC_Os11g06420.1 No alias transcription factor (TUB) 0.01 SeedPlants
Solyc02g085130.4.1 No alias transcription factor (TUB) 0.01 SeedPlants
Solyc10g046970.2.1 No alias transcription factor (TUB) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000007 Tubby_C 122 475
IPR001810 F-box_dom 58 111
No external refs found!